RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ROPN1BQ9BZX4 212 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 LSG1Q9H089 658 aaKnown RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 ROPN1Q9HAT0 212 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 PLGRKTQ9HBL7 147 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 TCP11X1B4DZS4 312 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 ECEL1O95672 775 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 CCNHP51946 323 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 DSG1Q02413 1049 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 RESTQ13127 1097 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 INSCQ1MX18 579 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 SPAG16Q8N0X2 631 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 PPP1R13BQ96KQ4 1090 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 INO80BQ9C086 356 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF69Q9UC07 566 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 NUDT1P36639 197 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 BRCC3P46736 316 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 RPL19P84098 196 aaKnown RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 ALFQ53S48 1182 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 PI16Q6UXB8 463 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 JADE3Q92613 823 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 NECTIN2Q92692 538 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 TCEAL7Q9BRU2 100 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 RABL2AQ9UBK7 228 aaPredicted RBP4□□□□□ -1.77
SYNE2-202ENST00000344113 AGTPBP1Q9UPW5 1226 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 STON1Q9Y6Q2 735 aa4□□□□□ -1.77
SYNE2-202ENST00000344113 PDE4DIPQ5VU43 2346 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SH3D21A4FU49 640 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GAS2O43903 313 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KCNA3P22001 575 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SERPINH1P50454 418 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KRT81Q14533 505 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF568Q3ZCX4 644 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF572Q7Z3I7 529 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 BIRC8Q96P09 236 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 POTECB2RU33 542 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GNAI2P04899 355 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 MAGEA4P43358 317 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TTC27Q6P3X3 843 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ADGRG6Q86SQ4 1221 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PLD3Q8IV08 490 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 COPG2Q9UBF2 871 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 CCT8L1PA6NM43 557 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 CCDC188H7C350 402 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 DLG1Q12959 904 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TMEM266Q2M3C6 531 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PLEKHO2Q8TD55 490 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 RILPQ96NA2 401 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KLHL4Q9C0H6 718 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GGNBP2Q9H3C7 697 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TRPC5Q9UL62 973 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KPNA3O00505 521 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM24O15164 1050 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KPNA6O60684 536 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 HMGN1P05114 100 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM49P0CI25 452 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TRIM49CP0CI26 452 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ABCB4P21439 1286 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 MAP4P27816 1152 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GMFBP60983 142 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 OSBPL6Q9BZF3 934 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SOS2Q07890 1332 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GPR75-ASB3A0A0A6YYF3 556 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ARF4P18085 180 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 MCM7P33993 719 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 FAM76BQ5HYJ3 339 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ZNHIT2Q9UHR6 403 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ASB3Q9Y575 518 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 VAV1P15498 845 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PCSK2P16519 638 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KPNA2P52292 529 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SIX6OS1Q8N1H7 587 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 CLHC1Q8NHS4 586 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 RIN3Q8TB24 985 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 HMG20AQ9NP66 347 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 NSMCE4AQ9NXX6 385 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TMEM9Q9P0T7 183 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 MEIS1O00470 390 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KRT1P04264 644 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 FGFR2P21802 821 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GRK2P25098 689 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SYKP43405 635 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ADARP55265 1226 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GSTA5Q7RTV2 222 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 KIFC2Q96AC6 838 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ADAM30Q9UKF2 790 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 ZNF232Q9UNY5 417 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 CLASP1Q7Z460 1538 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 C2orf81A6NN90 581 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 TAGLNQ01995 201 aaKnown RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 SLC9A5Q14940 896 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 EFCAB2Q5VUJ9 269 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 DPP8Q6V1X1 898 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PIGUQ9H490 435 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 GRID1Q9ULK0 1009 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PRR23D1E9PI22 279 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 BET1O15155 118 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 MTA2O94776 668 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-202ENST00000344113 RAB4BP61018 213 aa3.99□□□□□ -1.77
SYNE2-202ENST00000344113 CAV1Q03135 178 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms