RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 HNRNPDLO14979 420 aaKnown RBP5.11□□□□□ -1.59
CSMD3-203ENST00000343508 CAND2O75155 1236 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 MCF2P10911 925 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 KRT3P12035 628 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 CDK8P49336 464 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 MAPK7Q13164 816 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 KIAA1586Q9HCI6 787 aa5.11□□□□□ -1.59
CSMD3-203ENST00000343508 SMARCA1P28370 1054 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KLK7P49862 253 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MEA1Q16626 185 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 AGPAT1Q99943 283 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KLC2Q9H0B6 622 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SAYSD1Q9NPB0 183 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 APEX2Q9UBZ4 518 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NAGPAQ9UK23 515 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 COL15A1P39059 1388 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PP2D1A8MPX8 630 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ADAMTS2O95450 1211 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GALCP54803 685 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CACNB1Q02641 598 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SCARF1Q14162 830 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRAPPC3LQ5T215 181 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM59Q8IWR1 403 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RHOT1Q8IXI2 618 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DCP1AQ9NPI6 582 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PARVAQ9NVD7 372 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CHCHD3Q9NX63 227 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PCDHB4Q9Y5E5 795 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RICTORQ6R327 1708 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 A6NJR5 290 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ARL4CP56559 192 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TAP1Q03518 808 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DRAP1Q14919 205 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CNGA3Q16281 694 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MCF2L2Q86YR7 1114 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ATP11CQ8NB49 1132 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TTC17Q96AE7 1141 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ARL8AQ96BM9 186 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DYDC2Q96IM9 177 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 BHMT2Q9H2M3 363 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MRGBPQ9NV56 204 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NDUFA13Q9P0J0 144 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PKD2L1Q9P0L9 805 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRAPPC3O43617 180 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SHOX2O60902 331 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MXI1P50539 228 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TMPRSS15P98073 1019 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NTRK3Q16288 839 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GRAMD1BQ3KR37 738 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 KLHDC7AQ5VTJ3 777 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 BZW1Q7L1Q6 419 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CREG2Q8IUH2 290 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 UIMC1Q96RL1 719 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PFDN4Q9NQP4 134 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DCTN4Q9UJW0 460 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GNPATO15228 680 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RARGP13631 454 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RFC1P35251 1148 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PGM1P36871 562 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 XKR9Q5GH70 373 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MEI1Q5TIA1 1274 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CD302Q8IX05 232 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ABTB1Q969K4 478 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SEC31BQ9NQW1 1179 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 UVRAGQ9P2Y5 699 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MYH7P12883 1935 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 WDR91A4D1P6 747 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RIMBP2O15034 1052 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PDE1BQ01064 536 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DSG1Q02413 1049 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PREPLQ4J6C6 727 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GRAMD4Q6IC98 578 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RCSD1Q6JBY9 416 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TRIM72Q6ZMU5 477 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NUP85Q9BW27 656 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CNOT8Q9UFF9 292 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 EIF3DO15371 548 aaKnown RBP eCLIP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TNNC2P02585 160 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 MX2P20592 715 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RANBP1P43487 201 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PDIA6Q15084 440 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 RPS6KA2Q15349 733 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TBCCQ15814 346 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 HIF1AQ16665 826 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DAGLBQ8NCG7 672 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 COA7Q96BR5 231 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 GCOM2Q9BZD3 368 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 WWP1Q9H0M0 922 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NPHS2Q9NP85 383 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 TNS3Q68CZ2 1445 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PJA2O43164 708 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 CSF1RP07333 972 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 ATP2B4P23634 1241 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 SERPINB4P48594 390 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 VAMP7P51809 220 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 UBE2SQ16763 222 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 DARS2Q6PI48 645 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 PDZD8Q8NEN9 1154 aa5.1□□□□□ -1.59
CSMD3-203ENST00000343508 NAF1Q96HR8 494 aaKnown RBP5.1□□□□□ -1.59
CSMD3-203ENST00000343508 FAM161BQ96MY7 647 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms