RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 IFT74Q96LB3 600 aa24.26■■□□□ 1.47
RBM38-201ENST00000342690 MTIF3Q9H2K0 278 aaKnown RBP24.26■■□□□ 1.47
RBM38-201ENST00000342690 TMX1Q9H3N1 280 aa24.26■■□□□ 1.47
RBM38-201ENST00000342690 MINDY3Q9H8M7 445 aa24.26■■□□□ 1.47
RBM38-201ENST00000342690 DACT1Q9NYF0 836 aa24.26■■□□□ 1.47
RBM38-201ENST00000342690 ABHD14A-ACY1A0A1B0GW23 586 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 LRRIQ4A6NIV6 560 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 FAM13AO94988 1023 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 MYL1P05976 194 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 PTENP60484 403 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 WDR5P61964 334 aaKnown RBP24.25■■□□□ 1.47
RBM38-201ENST00000342690 POU5F1BQ06416 359 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 PPP2R5AQ15172 486 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 ODR4Q5SWX8 454 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 IFNLR1Q8IU57 520 aaPredicted RBP24.25■■□□□ 1.47
RBM38-201ENST00000342690 LINC01599Q8WXQ3 324 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 C7orf25Q9BPX7 421 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 TRIM9Q9C026 710 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 INO80BQ9C086 356 aaPredicted RBP24.25■■□□□ 1.47
RBM38-201ENST00000342690 PTPRSQ13332 1948 aa24.25■■□□□ 1.47
RBM38-201ENST00000342690 NAMPTP43490 491 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 ASIC1P78348 528 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 GRAMD1CQ8IYS0 662 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 NFKBIZQ9BYH8 718 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 ZHX3Q9H4I2 956 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 C17orf75Q9HAS0 396 aa24.24■■□□□ 1.47
RBM38-201ENST00000342690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.23■■□□□ 1.47
RBM38-201ENST00000342690 SFI1A8K8P3 1242 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 GTPBP6O43824 516 aaPredicted RBP24.23■■□□□ 1.47
RBM38-201ENST00000342690 MGEA5O60502 916 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 EFCAB14O75071 495 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 MBD3O95983 291 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 IDEP14735 1019 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 SFPQP23246 707 aaKnown RBP eCLIP24.23■■□□□ 1.471e-7■■■■■ 32.9
RBM38-201ENST00000342690 CDCA2Q69YH5 1023 aaPredicted RBP24.23■■□□□ 1.47
RBM38-201ENST00000342690 CNNM4Q6P4Q7 775 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.23■■□□□ 1.47
RBM38-201ENST00000342690 CCDC65Q8IXS2 484 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 KIFC3Q9BVG8 833 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 FTHL17Q9BXU8 183 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 PARVGQ9HBI0 331 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 LARSQ9P2J5 1176 aaKnown RBP24.23■■□□□ 1.47
RBM38-201ENST00000342690 SLC4A7Q9Y6M7 1214 aa24.23■■□□□ 1.47
RBM38-201ENST00000342690 ADGRA3Q8IWK6 1321 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 PLS3P13797 630 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 KCNJ6P48051 423 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 PEX3P56589 373 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 DEFB103AP81534 67 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 MBTD1Q05BQ5 628 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 DMP1Q13316 513 aaPredicted RBP24.22■■□□□ 1.47
RBM38-201ENST00000342690 POSTNQ15063 836 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 CATSPER4Q7RTX7 472 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 RTN4RL1Q86UN2 441 aaPredicted RBP24.22■■□□□ 1.47
RBM38-201ENST00000342690 DEPTORQ8TB45 409 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 DNAJC19Q96DA6 116 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 BLZF1Q9H2G9 400 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 KCNG1Q9UIX4 513 aa24.22■■□□□ 1.47
RBM38-201ENST00000342690 GAP43P17677 238 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 NPTX2P47972 431 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 ZNF131P52739 623 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 CUL4BQ13620 913 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 DSC3Q14574 896 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 ZBTB8OSQ8IWT0 167 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 MYCT1Q8N699 235 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 PANK4Q9NVE7 773 aa24.21■■□□□ 1.47
RBM38-201ENST00000342690 INO80B-WBP1J3KQ70 363 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 ENPP3O14638 875 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 CASP1P29466 404 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 SMTNP53814 917 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 FAM109BQ6ICB4 259 aaPredicted RBP24.2■■□□□ 1.46
RBM38-201ENST00000342690 ELOA2Q8IYF1 753 aaPredicted RBP24.2■■□□□ 1.46
RBM38-201ENST00000342690 CCDC47Q96A33 483 aaKnown RBP24.2■■□□□ 1.46
RBM38-201ENST00000342690 SLC9A7Q96T83 725 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 C2orf40Q9H1Z8 148 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 TSPYL2Q9H2G4 693 aaPredicted RBP24.2■■□□□ 1.46
RBM38-201ENST00000342690 SEL1LQ9UBV2 794 aa24.2■■□□□ 1.46
RBM38-201ENST00000342690 CCDC169A6NNP5 214 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 PRR29P0C7W0 189 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 AMHR2Q16671 573 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 UNC13DQ70J99 1090 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 GPT2Q8TD30 523 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 ADAM2Q99965 735 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 CCDC113Q9H0I3 377 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 KMT5AQ9NQR1 393 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 AGPAT5Q9NUQ2 364 aa24.19■■□□□ 1.46
RBM38-201ENST00000342690 PVALEFA0A1B0GWK0 134 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 FRMD3A2A2Y4 597 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 DENND3A2RUS2 1198 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 H0YCG3 227 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 TSPAN1O60635 241 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 AMHP03971 560 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 ATP2A2P16615 1042 aaKnown RBP24.18■■□□□ 1.46
RBM38-201ENST00000342690 COASYQ13057 564 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 FAM43BQ6ZT52 329 aaPredicted RBP24.18■■□□□ 1.46
RBM38-201ENST00000342690 TMCO2Q7Z6W1 182 aaPredicted RBP24.18■■□□□ 1.46
RBM38-201ENST00000342690 SFR1Q86XK3 245 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 MYOCDQ8IZQ8 938 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 SPIRE2Q8WWL2 714 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 RGS18Q9NS28 235 aa24.18■■□□□ 1.46
RBM38-201ENST00000342690 PIN4Q9Y237 131 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms