RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 SUN2Q9UH99 717 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 USP11P51784 963 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 SARS2Q9NP81 518 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 AGO2Q9UKV8 859 aaKnown RBP16.01■□□□□ 0.15
UBE3B-202ENST00000342494 KIF1BO60333 1816 aa16.01■□□□□ 0.15
UBE3B-202ENST00000342494 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 GSG1L2A8MUP6 293 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 KIF28PB7ZC32 967 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 ATG16L1Q676U5 607 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 GPD1LQ8N335 351 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 TRIM62Q9BVG3 475 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 ZMYND12Q9H0C1 365 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 C19orf81C9J6K1 198 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 HSPA4LO95757 839 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 VPS72Q15906 364 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 HABP4Q5JVS0 413 aaKnown RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 KATNAL1Q9BW62 490 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 KRT82Q9NSB4 513 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 PRDM15P57071 1507 aaPredicted RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 DUOXA2Q1HG44 320 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 DIS3Q9Y2L1 958 aaKnown RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 TDP2O95551 362 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 FOXD4Q12950 439 aaPredicted RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 EPHA7Q15375 998 aa16■□□□□ 0.15
UBE3B-202ENST00000342494 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
UBE3B-202ENST00000342494 E5RI56 91 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ACSL3O95573 720 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CTSHP09668 335 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 KIF19Q2TAC6 998 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF280CQ8ND82 737 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ULK4Q96C45 1275 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 TNIP3Q96KP6 325 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CYP26B1Q9NR63 512 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CFLARO15519 480 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CYP2B6P20813 491 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 AP3M2P53677 418 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 TOB2Q14106 344 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CEP55Q53EZ4 464 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 MB21D2Q8IYB1 491 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 LPAR1Q92633 364 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 SH3KBP1Q96B97 665 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 GPBP1L1Q9HC44 474 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 SYNGAP1Q96PV0 1343 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ORC4O43929 436 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 MFAP3LO75121 409 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 SMAP1Q8IYB5 467 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 OSBPL5Q9H0X9 879 aaPredicted RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 GGA3Q9NZ52 723 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 GGPS1O95749 300 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ATP1A3P13637 1013 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CASP1P29466 404 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 PTK2BQ14289 1009 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 NAALADL2Q58DX5 795 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 PDCD7Q8N8D1 485 aaKnown RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 DAGLAQ9Y4D2 1042 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 PI4K2BG5E9Z4 385 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 PODXLO00592 558 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CYBBP04839 570 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 KCNA4P22459 653 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CDC42EP1Q00587 391 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 HEATR6Q6AI08 1181 aaKnown RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 WHAMMQ8TF30 809 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 GIPC2Q8TF65 315 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 CPSF2Q9P2I0 782 aaKnown RBP15.99■□□□□ 0.15
UBE3B-202ENST00000342494 ITM2BQ9Y287 266 aa15.99■□□□□ 0.15
UBE3B-202ENST00000342494 PRKCBP05771 671 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 PRR5LQ6MZQ0 368 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 INTS2Q9H0H0 1204 aaKnown RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 ZNF500O60304 480 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 FAM102AQ5T9C2 384 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 HAUS6Q7Z4H7 955 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 SPATA2LQ8IUW3 424 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 MAML1Q92585 1016 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 PGBD4Q96DM1 585 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 DDX50Q9BQ39 737 aaKnown RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 SLC7A5P2Q9GIP4 190 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 MRPL46Q9H2W6 279 aaKnown RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 ABCC3O15438 1527 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 CCDC188H7C350 402 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 GRIK1P39086 918 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 RNF25Q96BH1 459 aaPredicted RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 CNOT10Q9H9A5 744 aaKnown RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 LGALS16A8MUM7 142 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 KRT38O76015 456 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 TMCC1O94876 653 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 YWHABP31946 246 aaKnown RBP15.98■□□□□ 0.15
UBE3B-202ENST00000342494 FBXW4P57775 412 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 ITPRIPL1Q6GPH6 555 aa15.98■□□□□ 0.15
UBE3B-202ENST00000342494 TADA2AO75478 443 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 UPP2O95045 317 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 KRT7P08729 469 aa15.97■□□□□ 0.15
UBE3B-202ENST00000342494 EIF3BP55884 814 aaKnown RBP15.97■□□□□ 0.15
UBE3B-202ENST00000342494 HUNKP57058 714 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms