RNA–Protein interactions for RNA: ENST00000341757.9

SCIN-202, Transcript of scinderin, humanhuman

TSL 1 (best)

Gene SCIN, Length 2,569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCIN-202ENST00000341757 ZBTB48P10074 688 aaPredicted RBP13.79□□□□□ -0.2
SCIN-202ENST00000341757 PDE1BQ01064 536 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 DSG1Q02413 1049 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 ITGA9Q13797 1035 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 RTN1Q16799 776 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 EAPPQ56P03 285 aaPredicted RBP13.79□□□□□ -0.2
SCIN-202ENST00000341757 TTC38Q5R3I4 469 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 TREML1Q86YW5 311 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 CRACR2BQ8N4Y2 399 aaPredicted RBP13.79□□□□□ -0.2
SCIN-202ENST00000341757 DGCR14Q96DF8 476 aaKnown RBP13.79□□□□□ -0.2
SCIN-202ENST00000341757 USP40Q9NVE5 1235 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 NDUFA13Q9P0J0 144 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 SNX24Q9Y343 169 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 WASF2Q9Y6W5 498 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 KRT2P35908 639 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 TCIRG1Q13488 830 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 MPP2Q14168 576 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 SLC18A3Q16572 532 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 CEP70Q8NHQ1 597 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 HSPBAP1Q96EW2 488 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 SNX27Q96L92 541 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 RASAL2Q9UJF2 1139 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 NALCNQ8IZF0 1738 aa13.79□□□□□ -0.2
SCIN-202ENST00000341757 A0A087X0T9 212 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 SPDYE16A6NNV3 312 aaPredicted RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 WDR46O15213 610 aaKnown RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 RIPK2O43353 540 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 PDE5AO76074 875 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 FAM228BP0C875 321 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 TAC1P20366 129 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 LIFRP42702 1097 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 ARFIP2P53365 341 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 DR1Q01658 176 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 NEXNQ0ZGT2 675 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 LONRF1Q17RB8 773 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 KLHL35Q6PF15 583 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 ZDHHC24Q6UX98 284 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 MYOCDQ8IZQ8 938 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 SDR16C5Q8N3Y7 309 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 FNDC8Q8TC99 324 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 ECSITQ9BQ95 431 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 TIMMDC1Q9NPL8 285 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 IPO5O00410 1097 aaKnown RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 TLR2O60603 784 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 NFKBIAP25963 317 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 VPS41P49754 854 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 PPP2R5CQ13362 524 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 IL17AQ16552 155 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 C16orf87Q6PH81 154 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 UNC13DQ70J99 1090 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.2
SCIN-202ENST00000341757 APPBP2Q92624 585 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 SLC4A4Q9Y6R1 1079 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 KDM3BQ7LBC6 1761 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 FOXO6A8MYZ6 492 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 SERPINB8P50452 374 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 CLCN2P51788 898 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 POLR2FP61218 127 aaKnown RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 TAF1BQ53T94 588 aaPredicted RBP13.78□□□□□ -0.2
SCIN-202ENST00000341757 SHISA4Q96DD7 197 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 EPB41L1Q9H4G0 881 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 NR2E1Q9Y466 385 aa13.78□□□□□ -0.2
SCIN-202ENST00000341757 KANSL1LA0AUZ9 987 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 BRAFP15056 766 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 FOXN2P32314 431 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 SMUG1Q53HV7 270 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 LRRC57Q8N9N7 239 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 FNBP1Q96RU3 617 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 HNRNPABQ99729 332 aaKnown RBP13.77□□□□□ -0.21
SCIN-202ENST00000341757 ROPN1BQ9BZX4 212 aaPredicted RBP13.77□□□□□ -0.21
SCIN-202ENST00000341757 ROPN1Q9HAT0 212 aaPredicted RBP13.77□□□□□ -0.21
SCIN-202ENST00000341757 ANGPTL2Q9UKU9 493 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 ATP6V0A2Q9Y487 856 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 EIF3FO00303 357 aaPredicted RBP13.77□□□□□ -0.21
SCIN-202ENST00000341757 FGGP02679 453 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 GSTT2P0CG29 244 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 GSTT2BP0CG30 244 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 GTF2H1P32780 548 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 KIAA1755Q5JYT7 1200 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 ARHGEF18Q6ZSZ5 1173 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 IQCF2Q8IXL9 164 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 OGFOD1Q8N543 542 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 GLG1Q92896 1179 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
SCIN-202ENST00000341757 EDEM3Q9BZQ6 932 aa13.77□□□□□ -0.21
SCIN-202ENST00000341757 METP08581 1390 aa13.76□□□□□ -0.21
SCIN-202ENST00000341757 VILLO15195 856 aa13.76□□□□□ -0.21
SCIN-202ENST00000341757 EXOC3O60645 756 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms