RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 TAF1DQ9H5J8 278 aaPredicted RBP12.85□□□□□ -0.35
CDH5-201ENST00000341529 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 SPATA31A6Q5VVP1 1343 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
CDH5-201ENST00000341529 PSMD14O00487 310 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 PSMD6Q15008 389 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 PPP6R3Q5H9R7 873 aaPredicted RBP12.85□□□□□ -0.35
CDH5-201ENST00000341529 STRIP1Q5VSL9 837 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 ZNF449Q6P9G9 518 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 NME8Q8N427 588 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 IL17RAQ96F46 866 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 ANKZF1Q9H8Y5 726 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 NOD1Q9Y239 953 aa12.85□□□□□ -0.35
CDH5-201ENST00000341529 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 AKAP3O75969 853 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 MMEP08473 750 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 CCND2P30279 289 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 HADHQ16836 314 aaKnown RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 SCFD1Q8WVM8 642 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 ARL8AQ96BM9 186 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 EXOC1LA0A1B0GW35 172 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 CLDN3O15551 220 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDH5-201ENST00000341529 CA4P22748 312 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 ATP11AP98196 1134 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 CCDC137Q6PK04 289 aaKnown RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 HSPH1Q92598 858 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 IKZF4Q9H2S9 585 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 L1RE1Q9UN81 338 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 PSAPP07602 524 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 RPA1P27694 616 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
CDH5-201ENST00000341529 SLC8A3P57103 927 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 ACTN3Q08043 901 aaPredicted RBP12.84□□□□□ -0.35
CDH5-201ENST00000341529 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 MAIP1Q8WWC4 291 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 RFFLQ8WZ73 363 aa12.84□□□□□ -0.35
CDH5-201ENST00000341529 CCDC188H7C350 402 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 BPIFB4P59827 614 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
CDH5-201ENST00000341529 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 CENPPQ6IPU0 288 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 STMN2Q93045 179 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 POP1Q99575 1024 aaKnown RBP12.83□□□□□ -0.36
CDH5-201ENST00000341529 SAYSD1Q9NPB0 183 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 HSPBP1Q9NZL4 362 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 NYAP2Q9P242 653 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 RCCD1A6NED2 376 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 FRMD5Q7Z6J6 570 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 MICAL1Q8TDZ2 1067 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 GRK7Q8WTQ7 553 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 DCPSQ96C86 337 aaKnown RBP12.83□□□□□ -0.36
CDH5-201ENST00000341529 C9orf72Q96LT7 481 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 DNAJC7Q99615 494 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 PSMC4P43686 418 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 EPHA7Q15375 998 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 KLHDC7AQ5VTJ3 777 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 RINT1Q6NUQ1 792 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 ACSF2Q96CM8 615 aaPredicted RBP12.83□□□□□ -0.36
CDH5-201ENST00000341529 ADPGKQ9BRR6 497 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 CBWD1Q9BRT8 395 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 EHD4Q9H223 541 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
CDH5-201ENST00000341529 KCNH7Q9NS40 1196 aa12.83□□□□□ -0.36
CDH5-201ENST00000341529 A0A087WUV0 522 aaPredicted RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 SSU72P8A0A1W2PR75 194 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 FOXN3O00409 490 aaPredicted RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 CAPN9O14815 690 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 RCN2Q14257 317 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 TRAPPC11Q7Z392 1133 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 LRRC8CQ8TDW0 803 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 KLHL29Q96CT2 875 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 CCDC97Q96F63 343 aaPredicted RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 MTRQ99707 1265 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 POLR3FQ9H1D9 316 aaPredicted RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 GINM1Q9NU53 330 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 ZNF70Q9UC06 446 aaPredicted RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 G3BP2Q9UN86 482 aaKnown RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 CNGA1P29973 690 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 POLR2BP30876 1174 aaKnown RBP12.82□□□□□ -0.36
CDH5-201ENST00000341529 SHMT1P34896 483 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 CUL1Q13616 776 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 NEDD9Q14511 834 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 KRT39Q6A163 491 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 MDM1Q8TC05 714 aa12.82□□□□□ -0.36
CDH5-201ENST00000341529 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms