RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PIGOQ8TEQ8 1089 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 AUTS2Q8WXX7 1259 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 MTMR9Q96QG7 549 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 KIF2CQ99661 725 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 HSD17B14Q9BPX1 270 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 TCF25Q9BQ70 676 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 ZSWIM4Q9H7M6 989 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 NRDE2Q9H7Z3 1164 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 TTC12Q9H892 705 aaPredicted RBP14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 FAM105AQ9NUU6 356 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 DACT1Q9NYF0 836 aa14.94□□□□□ -0.02
NUDCD3-201ENST00000338427 HOXA2O43364 376 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 GPR37L1O60883 481 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 EYA4O95677 639 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 EMC2Q15006 297 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF174Q15697 407 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 AGMOQ6ZNB7 445 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 FAM43BQ6ZT52 329 aaPredicted RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 MAEAQ7L5Y9 396 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 OTUD6AQ7L8S5 288 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 SLFN12Q8IYM2 578 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 LRRC43Q8N309 656 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 RNF149Q8NC42 400 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 BCL7CQ8WUZ0 217 aaPredicted RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 SLC7A3Q8WY07 619 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 PPP2R3CQ969Q6 453 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 NAP1L4Q99733 375 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 INO80BQ9C086 356 aaPredicted RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 GBP3Q9H0R5 595 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 POLD4Q9HCU8 107 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 BRMS1Q9HCU9 246 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 ENTPD7Q9NQZ7 604 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 DNAJB4Q9UDY4 337 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 PUF60Q9UHX1 559 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 LIMCH1Q9UPQ0 1083 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 USP15Q9Y4E8 981 aaPredicted RBP14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 PCDHB2Q9Y5E7 798 aa14.93□□□□□ -0.02
NUDCD3-201ENST00000338427 DKC1O60832 514 aaKnown RBP eCLIP14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 DDHD2O94830 711 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 CXCL14O95715 111 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 SFPQP23246 707 aaKnown RBP eCLIP14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 MCM7P33993 719 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 KCNC3Q14003 757 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 SYCE2Q6PIF2 218 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 FERMT3Q86UX7 667 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 RNF135Q8IUD6 432 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 ASAP3Q8TDY4 903 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 CPB2Q96IY4 423 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 JPH2Q9BR39 696 aaPredicted RBP14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 S1PR5Q9H228 398 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 TBC1D13Q9NVG8 400 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 MIOSQ9NXC5 875 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 PRKAG3Q9UGI9 489 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 FAM50BQ9Y247 325 aa14.92□□□□□ -0.02
NUDCD3-201ENST00000338427 POTEMA6NI47 508 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 ZNF623O75123 536 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 ZC3H11AO75152 810 aaKnown RBP eCLIP14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 GALTP07902 379 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 SPATA31C1P0DKV0 1188 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 CA8P35219 290 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 RFC5P40937 340 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 TECP42680 631 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 KRT17Q04695 432 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 COASYQ13057 564 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 TRIM29Q14134 588 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 NOMO2Q5JPE7 1267 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 SRGAP1Q7Z6B7 1085 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 CDR2LQ86X02 465 aaPredicted RBP14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 MRPL43Q8N983 215 aaKnown RBP14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 SMRP1Q8NCR6 262 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 TRAIPQ9BWF2 469 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 EIF2AQ9BY44 585 aaKnown RBP14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 AGPAT5Q9NUQ2 364 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 MUTYHQ9UIF7 546 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 LZTS1Q9Y250 596 aa14.91□□□□□ -0.02
NUDCD3-201ENST00000338427 C2orf71A6NGG8 1288 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 DCXO43602 365 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 NEMFO60524 1076 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 CLASP2O75122 1294 aaKnown RBP14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 MED24O75448 989 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 ARL2P36404 184 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 SLC11A1P49279 550 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 ALDH7A1P49419 539 aaKnown RBP14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 NBR1Q14596 966 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 CSPP1Q1MSJ5 1256 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 C12orf76Q8N812 135 aaPredicted RBP14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 SMG8Q8ND04 991 aaKnown RBP14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 RPGRIP1Q96KN7 1286 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 MTRQ99707 1265 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 VN1R3Q9BXE9 311 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 GPRC5CQ9NQ84 441 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 USP20Q9Y2K6 914 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 HES2Q9Y543 173 aa14.9□□□□□ -0.02
NUDCD3-201ENST00000338427 ASAP2O43150 1006 aa14.89□□□□□ -0.03
NUDCD3-201ENST00000338427 LYPLA2O95372 231 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms