RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 RFX1P22670 979 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 MYH9P35579 1960 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 PLA2G4FQ68DD2 849 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 KIAA0895Q8NCT3 520 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 SYN2Q92777 582 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 ELP3Q9H9T3 547 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 RPF1Q9H9Y2 349 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 ADAM21Q9UKJ8 722 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 BCL9LQ86UU0 1499 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 CYP26A1O43174 497 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 KRT1P04264 644 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 XRRA1Q6P2D8 792 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 TEX2Q8IWB9 1127 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 STK33Q9BYT3 514 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 MAP3K20Q9NYL2 800 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 RBAKQ9NYW8 714 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 AGO2Q9UKV8 859 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 DUSP10Q9Y6W6 482 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 ATF2P15336 505 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 TTLL4Q14679 1199 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 CYFIP1Q7L576 1253 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 OTOP1Q7RTM1 612 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 FAM83AQ86UY5 434 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 HACE1Q8IYU2 909 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 CCDC89Q8N998 374 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 NOA1Q8NC60 698 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 CYP2W1Q8TAV3 490 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 NLRP7Q8WX94 980 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 HAS1Q92839 578 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 GGPS1O95749 300 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 GBP1P32455 592 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 TRIM59Q8IWR1 403 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 KIAA1683Q9H0B3 1180 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 SPC25Q9HBM1 224 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 JPH1Q9HDC5 661 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 ANAPC7Q9UJX3 599 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 MUTP22033 750 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 LMNB2Q03252 620 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 LMBRD2Q68DH5 695 aaPredicted RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 C7orf31Q8N865 590 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 MOV10L1Q9BXT6 1211 aaKnown RBP6.77□□□□□ -1.33
PRKDC-202ENST00000338368 KCNMB3Q9NPA1 279 aa6.77□□□□□ -1.33
PRKDC-202ENST00000338368 CUL1Q13616 776 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF720Q7Z2F6 126 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SNX24Q9Y343 169 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 XPOTO43592 962 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ZRANB2O95218 330 aaKnown RBP eCLIP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SETDB1Q15047 1291 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 CAPN12Q6ZSI9 719 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 MAP7D3Q8IWC1 876 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 LRRC1Q9BTT6 524 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TAF1DQ9H5J8 278 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TMEM119Q4V9L6 283 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 RASSF4Q9H2L5 321 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 OLFML3Q9NRN5 406 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 GRID2IPA4D2P6 1211 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 MAN1A1P33908 653 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 FKBP1CQ5VVH2 108 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SCARA5Q6ZMJ2 495 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.331e-7■■□□□ 12.5
PRKDC-202ENST00000338368 MMTAG2Q9BU76 263 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 RTN2O75298 545 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TMEM253P0C7T8 217 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.332e-8■■□□□ 14.4
PRKDC-202ENST00000338368 GSPT2Q8IYD1 628 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 COG1Q8WTW3 980 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 HEMGNQ9BXL5 484 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 AGPAT3Q9NRZ7 376 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 WHAMMQ8TF30 809 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SEPT1Q8WYJ6 367 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 MRPL4Q9BYD3 311 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 CAPN9O14815 690 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 P4HA2O15460 535 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 STX2P32856 288 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ACOT2P49753 483 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SLMAPQ14BN4 828 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 GJB7Q6PEY0 223 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TAB3Q8N5C8 712 aaPredicted RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ANKRD42Q8N9B4 389 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ANAPC5Q9UJX4 755 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 XRN1Q8IZH2 1706 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 MED7O43513 233 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TMEM270Q6UE05 265 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 RDM1Q8NG50 284 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 FMO2Q99518 471 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 C2orf40Q9H1Z8 148 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 PNMA3Q9UL41 463 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 NOVA2Q9UNW9 492 aaKnown RBP6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ROBO3Q96MS0 1386 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 KLRC4O43908 158 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 SAMD3Q8N6K7 520 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 RNF149Q8NC42 400 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 ZNF507Q8TCN5 953 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 AP5M1Q9H0R1 490 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 PPP1R9AQ9ULJ8 1098 aa6.76□□□□□ -1.33
PRKDC-202ENST00000338368 TXNP10599 105 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms