RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 GRAMD1AQ96CP6 724 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 THTPAQ9BU02 230 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 TRABDQ9H4I3 376 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 A1CFQ9NQ94 594 aaKnown RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 ADGRB2O60241 1585 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 TPP2P29144 1249 aaPredicted RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 PPP4R1Q8TF05 950 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 CCDC97Q96F63 343 aaPredicted RBP14.16□□□□□ -0.14
COL2A1-201ENST00000337299 CARD9Q9H257 536 aa14.16□□□□□ -0.14
COL2A1-201ENST00000337299 MYMKA6NI61 221 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 SLC16A2P36021 539 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 SEMA3FQ13275 785 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 CYTH1Q15438 398 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 NT5DC1Q5TFE4 455 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 ELOA2Q8IYF1 753 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TUBB6Q9BUF5 446 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 EPB41L4AQ9HCS5 686 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 GRIN2DO15399 1336 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 EPHB2P29323 1055 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 ARL1P40616 181 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 MMP14P50281 582 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 BASP1P80723 227 aaKnown RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 DHX34Q14147 1143 aaKnown RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 RABL6Q3YEC7 729 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 MMEL1Q495T6 779 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 PYROXD1Q8WU10 500 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 C18orf8Q96DM3 657 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 DCDC2CA8MYV0 355 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 ZWINTO95229 277 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 KRT16P08779 473 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TRIM49P0CI25 452 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TRIM49CP0CI26 452 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 GJB7Q6PEY0 223 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 MFN1Q8IWA4 741 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 DDX50Q9BQ39 737 aaKnown RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TRAIPQ9BWF2 469 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 GDF3Q9NR23 364 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 ANAPC7Q9UJX3 599 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 NPHP3-ACAD11A0A0J9YXS1 232 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TDP2O95551 362 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 CFBP00751 764 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 UCHL3P15374 230 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 CD19P15391 556 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-201ENST00000337299 TMC3Q7Z5M5 1100 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 RHOT2Q8IXI1 618 aa14.15□□□□□ -0.14
COL2A1-201ENST00000337299 POTEB3A0JP26 581 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 POTECB2RU33 542 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 K7ENM7 598 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 CBX6O95503 412 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 DRD4P21917 467 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 NSFP46459 744 aaKnown RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 MKRN3Q13064 507 aaKnown RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 POTEBQ6S5H4 581 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 SFR1Q86XK3 245 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 LRGUKQ96M69 825 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 TRIM56Q9BRZ2 755 aaKnown RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 C1orf167Q5SNV9 1468 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 PVALEFA0A1B0GWK0 134 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 A0A1W2PQJ5 194 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 MIF4GDA9UHW6 222 aaKnown RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 CLDN3O15551 220 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 CCDC22O60826 627 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 ZCWPW2Q504Y3 356 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 SNX30Q5VWJ9 437 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 RNF25Q96BH1 459 aaPredicted RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.14□□□□□ -0.15
COL2A1-201ENST00000337299 FAM47DPA6NHR8 397 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 B2RBV5 119 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 CDH16O75309 829 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 ESRRGP62508 458 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 MFSD14BQ5SR56 506 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 SLC44A5Q8NCS7 719 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 MIS12Q9H081 205 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 ATP8A2Q9NTI2 1148 aa14.14□□□□□ -0.15
COL2A1-201ENST00000337299 COL15A1P39059 1388 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 MAGEA13PA6NCF6 341 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 RASSF9O75901 435 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 TRIP10Q15642 601 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 SMAD1Q15797 465 aaKnown RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 DOK7Q18PE1 504 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 SLC44A4Q53GD3 710 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 PDXDC2PQ6P474 469 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 ZBED8Q8IZ13 594 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 PROM2Q8N271 834 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 RBM17Q96I25 401 aaKnown RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 GPR101Q96P66 508 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-201ENST00000337299 EDEM3Q9BZQ6 932 aa14.13□□□□□ -0.15
COL2A1-201ENST00000337299 CCSER1Q9C0I3 900 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms