RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSX2-201ENST00000336777 TMEM192Q8IY95 271 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
SSX2-201ENST00000336777 CPB2Q96IY4 423 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
SSX2-201ENST00000336777 KIFC3Q9BVG8 833 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 RAB34Q9BZG1 259 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 INO80BQ9C086 356 aaPredicted RBP11.69□□□□□ -0.54
SSX2-201ENST00000336777 C1orf112Q9NSG2 853 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 ANKEF1Q9NU02 776 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 MYH15Q9Y2K3 1946 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 B4GALT5O43286 388 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 ERLIN2O94905 339 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 LINC00271P0C7V0 271 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 ATF7P17544 494 aaPredicted RBP11.69□□□□□ -0.54
SSX2-201ENST00000336777 PDCP20941 246 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 GPM6BQ13491 265 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 SF3A1Q15459 793 aaKnown RBP11.69□□□□□ -0.54
SSX2-201ENST00000336777 KRT79Q5XKE5 535 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 KCNK18Q7Z418 384 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 BRAPQ7Z569 592 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 HELQQ8TDG4 1101 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 BSNDQ8WZ55 320 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 MTMR6Q9Y217 621 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 INPP5FQ9Y2H2 1132 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 PPME1Q9Y570 386 aa11.69□□□□□ -0.54
SSX2-201ENST00000336777 LAD1O00515 517 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
SSX2-201ENST00000336777 PRPHP41219 470 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 MBTD1Q05BQ5 628 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 ECHDC2Q86YB7 292 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 CMTR2Q8IYT2 770 aaKnown RBP11.68□□□□□ -0.54
SSX2-201ENST00000336777 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 RASSF8Q8NHQ8 419 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 MMTAG2Q9BU76 263 aaKnown RBP11.68□□□□□ -0.54
SSX2-201ENST00000336777 RUSC1Q9BVN2 902 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 APOL6Q9BWW8 343 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 ALG13Q9NP73 1137 aaKnown RBP11.68□□□□□ -0.54
SSX2-201ENST00000336777 AGPAT5Q9NUQ2 364 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 RNF19AQ9NV58 838 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 TMEM161AQ9NX61 479 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 DBR1Q9UK59 544 aaKnown RBP11.68□□□□□ -0.54
SSX2-201ENST00000336777 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 CLIC4Q9Y696 253 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 PLXNA4Q9HCM2 1894 aa11.68□□□□□ -0.54
SSX2-201ENST00000336777 GRM6O15303 877 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 STX6O43752 255 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 TSPAN1O60635 241 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
SSX2-201ENST00000336777 ARL2P36404 184 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 TFDP1Q14186 410 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 SNX21Q969T3 373 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
SSX2-201ENST00000336777 PNMA5Q96PV4 448 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
SSX2-201ENST00000336777 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 FAM105AQ9NUU6 356 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 PCDHGC5Q9Y5F6 944 aa11.67□□□□□ -0.54
SSX2-201ENST00000336777 EDN1P05305 212 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 PTENP60484 403 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 TFF2Q03403 129 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 PKP1Q13835 747 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 DHX8Q14562 1220 aaKnown RBP11.66□□□□□ -0.54
SSX2-201ENST00000336777 MXD4Q14582 209 aaPredicted RBP11.66□□□□□ -0.54
SSX2-201ENST00000336777 EP400NLQ6ZTU2 488 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 SRGAP1Q7Z6B7 1085 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 CABP7Q86V35 215 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 LRRC43Q8N309 656 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 PDCD7Q8N8D1 485 aaKnown RBP11.66□□□□□ -0.54
SSX2-201ENST00000336777 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 LRRC15Q8TF66 581 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 SAMD11Q96NU1 681 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 C11orf84Q9BUA3 381 aaPredicted RBP11.66□□□□□ -0.54
SSX2-201ENST00000336777 TYW1Q9NV66 732 aaKnown RBP11.66□□□□□ -0.54
SSX2-201ENST00000336777 THEGQ9P2T0 379 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 HES2Q9Y543 173 aa11.66□□□□□ -0.54
SSX2-201ENST00000336777 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 A0A0U1RQF3 1178 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 H3BNC9 293 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 HIP1RO75146 1068 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 BMPR1AP36894 532 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 CDC42EP1Q00587 391 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 PDIA5Q14554 519 aa11.65□□□□□ -0.54
SSX2-201ENST00000336777 KARSQ15046 597 aaKnown RBP11.65□□□□□ -0.54
SSX2-201ENST00000336777 AMHR2Q16671 573 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms