RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ITM2BQ9Y287 266 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 GMNCA6NCL1 334 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 TRADDQ15628 312 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 C1orf146Q5VVC0 180 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 RGS9BPQ6ZS82 235 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 SYDE1Q6ZW31 735 aaPredicted RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 ATP11CQ8NB49 1132 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 RAD54LQ92698 747 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PUS7LQ9H0K6 701 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 ZBTB5O15062 677 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 HUS1O60921 280 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 SDC4P31431 198 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PEX3P56589 373 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 DHX34Q14147 1143 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 CCDC90BQ9GZT6 254 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 G3BP2Q9UN86 482 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 ABCB11O95342 1321 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 H0YC42 278 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 KIAA0391O15091 583 aaKnown RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 KRT14P02533 472 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 PFKFB3Q16875 520 aaPredicted RBP13.91□□□□□ -0.18
HLCS-201ENST00000336648 ZNF699Q32M78 642 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 SH3TC2Q8TF17 1288 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.18
HLCS-201ENST00000336648 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
HLCS-201ENST00000336648 GCC2Q8IWJ2 1684 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 COPB2P35606 906 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 STXBP2Q15833 593 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 ANGPTL8Q6UXH0 198 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 TRIM54Q9BYV2 358 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 OSBPL5Q9H0X9 879 aaPredicted RBP13.9□□□□□ -0.18
HLCS-201ENST00000336648 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 UBE4BO95155 1302 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 ESRRBO95718 433 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 ARFIP2P53365 341 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 SLC7A5Q01650 507 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 SLC10A5Q5PT55 438 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 ELMOD1Q8N336 334 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 RAPGEF5Q92565 580 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 OTUB1Q96FW1 271 aaPredicted RBP13.9□□□□□ -0.18
HLCS-201ENST00000336648 PPCSQ9HAB8 311 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 NEO1Q92859 1461 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 CTTNQ14247 550 aaKnown RBP13.9□□□□□ -0.18
HLCS-201ENST00000336648 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 TARSL2A2RTX5 802 aaKnown RBP13.9□□□□□ -0.18
HLCS-201ENST00000336648 ARPP19P56211 112 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 PTPN12Q05209 780 aaKnown RBP13.9□□□□□ -0.18
HLCS-201ENST00000336648 C1orf228Q6PIY5 440 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.9□□□□□ -0.18
HLCS-201ENST00000336648 STAMBPL1Q96FJ0 436 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 OSBPL1AQ9BXW6 950 aa13.9□□□□□ -0.18
HLCS-201ENST00000336648 SYNMO15061 1565 aa13.9□□□□□ -0.19
HLCS-201ENST00000336648 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 HMGB3O15347 200 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 GNL1P36915 607 aaPredicted RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 TMED10P49755 219 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 UBE2SQ16763 222 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 MRPS26Q9BYN8 205 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 GTSE1Q9NYZ3 720 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 SESN1Q9Y6P5 492 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 CAPRIN1Q14444 709 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 SNF8Q96H20 258 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 EML4Q9HC35 981 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 A0A1W2PQC6 194 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 SLC26A4O43511 780 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 WDR47O94967 919 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 NNMTP40261 264 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 GPC3P51654 580 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 HNRNPH2P55795 449 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 MECOMQ03112 1051 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 RHOT1Q8IXI2 618 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 FLCNQ8NFG4 579 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 PCDHA6Q9UN73 950 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 PCDHA8Q9Y5H6 950 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 MYO1CO00159 1063 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 PPP6R3Q5H9R7 873 aaPredicted RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 RNF103-CHMP3A0A140T963 221 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 PRKAB2O43741 272 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 KRT16P08779 473 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 HEATR6Q6AI08 1181 aaKnown RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 ZNF564Q8TBZ8 553 aaPredicted RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 ANTXR1Q9H6X2 564 aa13.89□□□□□ -0.19
HLCS-201ENST00000336648 CAB39Q9Y376 341 aaPredicted RBP13.89□□□□□ -0.19
HLCS-201ENST00000336648 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 NCAPD2Q15021 1401 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 ABCE1P61221 599 aaKnown RBP13.88□□□□□ -0.19
HLCS-201ENST00000336648 TERF2Q15554 542 aa13.88□□□□□ -0.19
HLCS-201ENST00000336648 CC2D1AQ6P1N0 951 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms