RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 XPNPEP1Q9NQW7 623 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 C19orf81C9J6K1 198 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 EIF3DO15371 548 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ATMINO43313 823 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 PHACTR2O75167 634 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ATP4AP20648 1035 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ACOT2P49753 483 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 KRT76Q01546 638 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ALKBH5Q6P6C2 394 aaKnown RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ACCSQ96QU6 501 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 FAM213AQ9BRX8 229 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 POLR3FQ9H1D9 316 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 OSGEPQ9NPF4 335 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 PLCB1Q9NQ66 1216 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ANKFY1Q9P2R3 1169 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 TMEM110-MUSTN1A8MSY1 372 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 HNRNPDLO14979 420 aaKnown RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 KRT13P13646 458 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 WNT7BP56706 349 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 SLC18A3Q16572 532 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ZBTB41Q5SVQ8 909 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 FBXO16Q8IX29 292 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 PPM1KQ8N3J5 372 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 GPR161Q8N6U8 529 aaKnown RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ADARB2Q9NS39 739 aaKnown RBP13.69□□□□□ -0.22
LIMK1-201ENST00000336180 STK24Q9Y6E0 443 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 MYH11P35749 1972 aa13.69□□□□□ -0.22
LIMK1-201ENST00000336180 ZSCAN5CA6NGD5 496 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 DDX3XO00571 662 aaKnown RBP eCLIP13.68□□□□□ -0.221e-7■■□□□ 13.9
LIMK1-201ENST00000336180 PPP1R37O75864 691 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 MYBL2P10244 700 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 CNGA1P29973 690 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 VAMP7P51809 220 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 LRRC71Q8N4P6 559 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 RABGGTAQ92696 567 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 ARGLU1Q9NWB6 273 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 ARIH2O95376 493 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TNNT3P45378 269 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 DMP1Q13316 513 aaPredicted RBP13.68□□□□□ -0.22
LIMK1-201ENST00000336180 SLC39A4Q6P5W5 647 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 STXBP4Q6ZWJ1 553 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 EGFL6Q8IUX8 553 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 C4orf19Q8IY42 314 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 SEMA4DQ92854 862 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 OPTNQ96CV9 577 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 FAM212AQ96EL1 285 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 OSBPL9Q96SU4 736 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TLR10Q9BXR5 811 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 IGSF9BQ9UPX0 1349 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 PLA2G4AP47712 749 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 C1orf220Q5T0J3 134 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 NAA35Q5VZE5 725 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 NOX5Q96PH1 765 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 TBX20Q9UMR3 447 aa13.68□□□□□ -0.22
LIMK1-201ENST00000336180 N4BP1O75113 896 aaKnown RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 UBA1P22314 1058 aaKnown RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 JAK3P52333 1124 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 STXBP2Q15833 593 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 CCDC181Q5TID7 509 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 CPNE8Q86YQ8 564 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 XXYLT1Q8NBI6 393 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 DMAC2Q9NW81 257 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 NAGPAQ9UK23 515 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 SNX12Q9UMY4 172 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 F8VZ95 297 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 ALDH5A1P51649 535 aaPredicted RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 IGBP1P78318 339 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 CDK17Q00537 523 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 SNRNP35Q16560 246 aaKnown RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 WHAMMP3Q1A5X7 153 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 ARFGAP3Q9NP61 516 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 CYP26B1Q9NR63 512 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
LIMK1-201ENST00000336180 RBBP6Q7Z6E9 1792 aaKnown RBP13.67□□□□□ -0.22
LIMK1-201ENST00000336180 SLC16A3O15427 465 aaKnown RBP13.66□□□□□ -0.22
LIMK1-201ENST00000336180 GGPS1O95749 300 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 EDN1P05305 212 aa13.66□□□□□ -0.22
LIMK1-201ENST00000336180 PSAPP07602 524 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms