RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 RESTQ13127 1097 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 MXD4Q14582 209 aaPredicted RBP16.57■□□□□ 0.24
KATNA1-201ENST00000335643 UBXN11Q5T124 520 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 IFNLR1Q8IU57 520 aaPredicted RBP16.57■□□□□ 0.24
KATNA1-201ENST00000335643 KLHL23Q8NBE8 558 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 HELQQ8TDG4 1101 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 SNX21Q969T3 373 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 TRAIPQ9BWF2 469 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 DACT1Q9NYF0 836 aa16.57■□□□□ 0.24
KATNA1-201ENST00000335643 ARHGEF35A5YM69 484 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 B4GALT5O43286 388 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 TSPAN1O60635 241 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 ITGB1P05556 798 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 RB1P06400 928 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 MUTP22033 750 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 PBX3P40426 434 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 SKIV2LQ15477 1246 aaKnown RBP16.56■□□□□ 0.24
KATNA1-201ENST00000335643 BRAPQ7Z569 592 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 CPB2Q96IY4 423 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 PNMA5Q96PV4 448 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
KATNA1-201ENST00000335643 TMEM117Q9H0C3 514 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 THEGQ9P2T0 379 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 PLAGL2Q9UPG8 496 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 RWDD3Q9Y3V2 267 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
KATNA1-201ENST00000335643 CYP11B2P19099 503 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 AFF1P51825 1210 aaKnown RBP16.55■□□□□ 0.24
KATNA1-201ENST00000335643 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
KATNA1-201ENST00000335643 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 SPPL3Q8TCT6 385 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 LRRC15Q8TF66 581 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 P2RX5Q93086 422 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 PLIN2Q99541 437 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 PLVAPQ9BX97 442 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 MTMR6Q9Y217 621 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 BRWD1Q9NSI6 2320 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 TTLL13PA6NNM8 815 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 INO80B-WBP1J3KQ70 363 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 EOMESO95936 686 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 EDN1P05305 212 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 PDCP20941 246 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 POU5F1BQ06416 359 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 TCEAL5Q5H9L2 206 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 CDR2LQ86X02 465 aaPredicted RBP16.55■□□□□ 0.24
KATNA1-201ENST00000335643 COLGALT1Q8NBJ5 622 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 MCPH1Q8NEM0 835 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 COL25A1Q9BXS0 654 aaPredicted RBP16.55■□□□□ 0.24
KATNA1-201ENST00000335643 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
KATNA1-201ENST00000335643 NFKBIZQ9BYH8 718 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 PCDHB2Q9Y5E7 798 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 PCDHGC5Q9Y5F6 944 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 CLIC4Q9Y696 253 aa16.55■□□□□ 0.24
KATNA1-201ENST00000335643 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 B4GALT3O60512 393 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 ZNF623O75123 536 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 ARF4P18085 180 aaPredicted RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 IRS1P35568 1242 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 TFDP1Q14186 410 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 ZRSR1Q15695 479 aaKnown RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 PTPROQ16827 1216 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 HYIQ5T013 277 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 SPOUT1Q5T280 376 aaKnown RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 SMG8Q8ND04 991 aaKnown RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 RUSC1Q9BVN2 902 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
KATNA1-201ENST00000335643 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
KATNA1-201ENST00000335643 CUL9Q8IWT3 2517 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 HOXA2O43364 376 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 ERLIN2O94905 339 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 EYA4O95677 639 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 KCNQ1P51787 676 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 PTPAQ15257 358 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 ABI1Q8IZP0 508 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 DAW1Q8N136 415 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 LRRC43Q8N309 656 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 POF1BQ8WVV4 589 aa16.53■□□□□ 0.24
KATNA1-201ENST00000335643 OFD1O75665 1012 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 GTF2F1P35269 517 aaKnown RBP eCLIP16.52■□□□□ 0.24
KATNA1-201ENST00000335643 MRPL10Q7Z7H8 261 aaKnown RBP16.52■□□□□ 0.24
KATNA1-201ENST00000335643 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
KATNA1-201ENST00000335643 ASB2Q96Q27 587 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 NSUN3Q9H649 340 aaKnown RBP16.52■□□□□ 0.24
KATNA1-201ENST00000335643 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 HES2Q9Y543 173 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 STK24Q9Y6E0 443 aa16.52■□□□□ 0.24
KATNA1-201ENST00000335643 TCF20Q9UGU0 1960 aaKnown RBP16.52■□□□□ 0.24
KATNA1-201ENST00000335643 STX6O43752 255 aa16.51■□□□□ 0.23
KATNA1-201ENST00000335643 FGF18O76093 207 aa16.51■□□□□ 0.23
KATNA1-201ENST00000335643 RAB27AP51159 221 aa16.51■□□□□ 0.23
KATNA1-201ENST00000335643 MAPK7Q13164 816 aa16.51■□□□□ 0.23
KATNA1-201ENST00000335643 TMEM119Q4V9L6 283 aa16.51■□□□□ 0.23
KATNA1-201ENST00000335643 TIGD5Q53EQ6 642 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms