RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 GPR88Q9GZN0 384 aa25.5■■□□□ 1.67
TSKU-201ENST00000333090 MTRF1LQ9UGC7 380 aaKnown RBP25.5■■□□□ 1.67
TSKU-201ENST00000333090 POLLQ9UGP5 575 aa25.5■■□□□ 1.67
TSKU-201ENST00000333090 RABGAP1Q9Y3P9 1069 aa25.5■■□□□ 1.67
TSKU-201ENST00000333090 MEIS2O14770 477 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 PHF2O75151 1096 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 TRIM49P0CI25 452 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 TRIM49CP0CI26 452 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 MARCKSL1P49006 195 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 CLNS1AP54105 237 aaKnown RBP25.49■■□□□ 1.67
TSKU-201ENST00000333090 COG2Q14746 738 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 ACCSLQ4AC99 568 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 ABCF3Q9NUQ8 709 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 RGL1Q9NZL6 768 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 GGT7Q9UJ14 662 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 GGA1Q9UJY5 639 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 ANKRD62A6NC57 917 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 FAM86B1E9PN63 330 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 FAM86B2P0C5J1 330 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 GBP2P32456 591 aaPredicted RBP25.49■■□□□ 1.67
TSKU-201ENST00000333090 PTGIRP43119 386 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 COL23A1Q86Y22 540 aaPredicted RBP25.49■■□□□ 1.67
TSKU-201ENST00000333090 PRELID2Q8N945 189 aa25.49■■□□□ 1.67
TSKU-201ENST00000333090 ECM2O94769 699 aaPredicted RBP25.48■■□□□ 1.67
TSKU-201ENST00000333090 SHMT1P34896 483 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 MYCT1Q8N699 235 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 PIGOQ8TEQ8 1089 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 CTTNBP2NLQ9P2B4 639 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 DBR1Q9UK59 544 aaKnown RBP25.48■■□□□ 1.67
TSKU-201ENST00000333090 SYNGAP1Q96PV0 1343 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 CHRNA3P32297 505 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 LENG9Q96B70 501 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 ZMYM2Q9UBW7 1377 aa25.48■■□□□ 1.67
TSKU-201ENST00000333090 C6orf229H3BNL8 230 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 RASGRF2O14827 1237 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 FAM13AO94988 1023 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 CYP2J2P51589 502 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 SNAP25P60880 206 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 TTC27Q6P3X3 843 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 KIRREL3Q8IZU9 778 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 NSRP1Q9H0G5 558 aaKnown RBP25.47■■□□□ 1.67
TSKU-201ENST00000333090 INTS2Q9H0H0 1204 aaKnown RBP25.47■■□□□ 1.67
TSKU-201ENST00000333090 CNOT7Q9UIV1 285 aaKnown RBP25.47■■□□□ 1.67
TSKU-201ENST00000333090 MMP14P50281 582 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 MOXD1Q6UVY6 613 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 DHX37Q8IY37 1157 aaKnown RBP25.47■■□□□ 1.67
TSKU-201ENST00000333090 OLFML3Q9NRN5 406 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 APEX2Q9UBZ4 518 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 CHORDC1Q9UHD1 332 aaPredicted RBP25.47■■□□□ 1.67
TSKU-201ENST00000333090 AGAP1Q9UPQ3 857 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 PTPN22Q9Y2R2 807 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 COL24A1Q17RW2 1714 aa25.47■■□□□ 1.67
TSKU-201ENST00000333090 PSEN1P49768 467 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 CLUL1Q15846 466 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 TLDC1Q6P9B6 456 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 CCDC137Q6PK04 289 aaKnown RBP25.46■■□□□ 1.67
TSKU-201ENST00000333090 CCDC25Q86WR0 208 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 UBL4BQ8N7F7 174 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 TBC1D22AQ8WUA7 517 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 STAMBPL1Q96FJ0 436 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.46■■□□□ 1.67
TSKU-201ENST00000333090 RIPK2O43353 540 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 GTF2IP78347 998 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 AP3B2Q13367 1082 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 LRRC14Q15048 493 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 RINT1Q6NUQ1 792 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 TEX2Q8IWB9 1127 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 ZDHHC14Q8IZN3 488 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 MGARPQ8TDB4 240 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 DYDC1Q8WWB3 177 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 AFF2P51816 1311 aa25.46■■□□□ 1.67
TSKU-201ENST00000333090 TBX3O15119 743 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 ATP2B4P23634 1241 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 CYP2W1Q8TAV3 490 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 SLC20A1Q8WUM9 679 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 CRYGNQ8WXF5 182 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 EIF2AK1Q9BQI3 630 aaKnown RBP25.45■■□□□ 1.67
TSKU-201ENST00000333090 CCDC134Q9H6E4 229 aa25.45■■□□□ 1.67
TSKU-201ENST00000333090 FRMPD4Q14CM0 1322 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 FOXN3O00409 490 aaPredicted RBP25.45■■□□□ 1.66
TSKU-201ENST00000333090 PODXLO00592 558 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 EYA4O95677 639 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 MYO1EQ12965 1108 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 AUHQ13825 339 aaKnown RBP25.45■■□□□ 1.66
TSKU-201ENST00000333090 CNGA2Q16280 664 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 USH1GQ495M9 461 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 RHOT2Q8IXI1 618 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 STMN4Q9H169 189 aaPredicted RBP25.45■■□□□ 1.66
TSKU-201ENST00000333090 PARP2Q9UGN5 583 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 BCS1LQ9Y276 419 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 L3MBTL1Q9Y468 752 aa25.45■■□□□ 1.66
TSKU-201ENST00000333090 EML1O00423 815 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 MSH4O15457 936 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 UBOX5O94941 541 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 SERPINB2P05120 415 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 Q4G0T1 1027 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 CROCCP2Q86T23 111 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 PCYOX1Q9UHG3 505 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 A0A1B0GUA9 196 aa25.44■■□□□ 1.66
TSKU-201ENST00000333090 GYS1P13807 737 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms