RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SLC38A7Q9NVC3 462 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
COL4A5-201ENST00000328300 CAPN11Q9UMQ6 739 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 OAZ1P54368 228 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 NR1H3Q13133 447 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 KAZNQ674X7 775 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 PDXDC1Q6P996 788 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 ERO1BQ86YB8 467 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 WNT8AQ9H1J5 351 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 SALL3Q9BXA9 1300 aa12.23□□□□□ -0.45
COL4A5-201ENST00000328300 MOCS3O95396 460 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 DR1Q01658 176 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 TROAPQ12815 778 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 GKAP1Q5VSY0 366 aaPredicted RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 ACRBPQ8NEB7 543 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 PRMT7Q9NVM4 692 aaPredicted RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 ZDHHC9Q9Y397 364 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 TTI1O43156 1089 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 SEPT6Q14141 434 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 BSPRYQ5W0U4 402 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 RAB3IPQ96QF0 476 aaPredicted RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 USH1CQ9Y6N9 552 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 SOX5P35711 763 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 BIRC2Q13490 618 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.453e-6■■■■■ 50.8
COL4A5-201ENST00000328300 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 SDCCAG8Q86SQ7 713 aaPredicted RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 ACAP3Q96P50 834 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 ANKRD26Q9UPS8 1709 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 SSU72P8A0A1W2PR75 194 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 ATP1A3P13637 1013 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
COL4A5-201ENST00000328300 OSTNP61366 133 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 CENPUQ71F23 418 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 TTC25Q96NG3 672 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 KLC2Q9H0B6 622 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
COL4A5-201ENST00000328300 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 EVI5O60447 810 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 ZBED1O96006 694 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 CD4P01730 458 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 GCLMP48507 274 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 CPT1AP50416 773 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 PPP2R5DQ14738 602 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 Q3C1V9 767 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 LRRC31Q6UY01 552 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.21□□□□□ -0.455e-8■■□□□ 11.6
COL4A5-201ENST00000328300 MRRFQ96E11 262 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 IGSF9BQ9UPX0 1349 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 A0A1W2PQJ5 194 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 NKRFO15226 690 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 SKIP12755 728 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 CD302Q8IX05 232 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 PDIK1LQ8N165 341 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 DDX50Q9BQ39 737 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 TRIM56Q9BRZ2 755 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 SUCLA2Q9P2R7 463 aaPredicted RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 ADAMTS1Q9UHI8 967 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 NOL3O60936 208 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 SDC4P31431 198 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 SLC26A2P50443 739 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 RBP5P82980 135 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 METTL16Q86W50 562 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 RPUSD2Q8IZ73 545 aaKnown RBP12.21□□□□□ -0.45
COL4A5-201ENST00000328300 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
COL4A5-201ENST00000328300 SFI1A8K8P3 1242 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 AP3B1O00203 1094 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 PRR29P0C7W0 189 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 ACTN1P12814 892 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 MSH2P43246 934 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 CHAMP1Q96JM3 812 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 TUBB6Q9BUF5 446 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 MAD1L1Q9Y6D9 718 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 PAMP19021 973 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 CA4P22748 312 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 EMC2Q15006 297 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 ZNF677Q86XU0 584 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 DDX23Q9BUQ8 820 aaKnown RBP12.21□□□□□ -0.46
COL4A5-201ENST00000328300 IDI2Q9BXS1 227 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.46
COL4A5-201ENST00000328300 KBTBD13C9JR72 458 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 TPD52P55327 224 aaPredicted RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 DHX40Q8IX18 779 aaKnown RBP12.2□□□□□ -0.46
COL4A5-201ENST00000328300 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 ADCY2Q08462 1091 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 CCL15Q16663 113 aa12.2□□□□□ -0.46
COL4A5-201ENST00000328300 SH2D4BQ5SQS7 431 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms