RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 CAPS2Q9BXY5 557 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 EHD4Q9H223 541 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 AGPAT3Q9NRZ7 376 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 TMEM51Q9NW97 253 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 SNX12Q9UMY4 172 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 PLAGL2Q9UPG8 496 aa12.73□□□□□ -0.37
DDR1-223ENST00000324771 EPHB6O15197 1021 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 GGCXP38435 758 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 TFDP1Q14186 410 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 KRT81Q14533 505 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 ECM1Q16610 540 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 OR6B2Q6IFH4 312 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 CATSPER4Q7RTX7 472 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 IDI2Q9BXS1 227 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 ITIH6Q6UXX5 1313 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 MEIS2O14770 477 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 EZRP15311 586 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 SFNP31947 248 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 BPIFB4P59827 614 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 MUM1L1Q5H9M0 696 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 CEP57Q86XR8 500 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 FBXL13Q8NEE6 735 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 MMTAG2Q9BU76 263 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 PI4K2BG5E9Z4 385 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 SGK1O00141 431 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 ICAM1P05362 532 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 FAM71BQ8TC56 605 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 SYTL5Q8TDW5 730 aaPredicted RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 C1orf54Q8WWF1 131 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 NUP85Q9BW27 656 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 RPF1Q9H9Y2 349 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 SPON1Q9HCB6 807 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 RBM12Q9NTZ6 932 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 SAMD15Q9P1V8 674 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 NOVA2Q9UNW9 492 aaKnown RBP12.72□□□□□ -0.37
DDR1-223ENST00000324771 NUB1Q9Y5A7 615 aa12.72□□□□□ -0.37
DDR1-223ENST00000324771 H7C0C1 242 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 M0QZ92 97 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 CAPN9O14815 690 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 ATP5OP48047 213 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 NNTQ13423 1086 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
DDR1-223ENST00000324771 NT5DC1Q5TFE4 455 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 MLXIPLQ9NP71 852 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 COMMD10Q9Y6G5 202 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 FOXN3O00409 490 aaPredicted RBP12.71□□□□□ -0.37
DDR1-223ENST00000324771 KRT1P04264 644 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 ATF2P15336 505 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 GPC5P78333 572 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 DR1Q01658 176 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 PDCLQ13371 301 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 C10orf76Q5T2E6 689 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 KLHDC7AQ5VTJ3 777 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 DLK2Q6UY11 383 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 TNFRSF25Q93038 417 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 PNKPQ96T60 521 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.37
DDR1-223ENST00000324771 AFDNP55196 1824 aaKnown RBP12.71□□□□□ -0.38
DDR1-223ENST00000324771 F5H423 210 aaPredicted RBP12.71□□□□□ -0.38
DDR1-223ENST00000324771 KLRC4O43908 158 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 CNTN2Q02246 1040 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 SYCP2LQ5T4T6 812 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 MTMR9Q96QG7 549 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 FGFBP2Q9BYJ0 223 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 FAM169AQ9Y6X4 670 aa12.71□□□□□ -0.38
DDR1-223ENST00000324771 SLITRK3O94933 977 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 P4HA1P13674 534 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 BACE1P56817 501 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 HERVK_113P62684 666 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 NPY5RQ15761 445 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 TRIM65Q6PJ69 517 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 APEX2Q9UBZ4 518 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 ANO9A1A5B4 782 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 PLS3P13797 630 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 ARL1P40616 181 aaPredicted RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 KCNJ1P48048 391 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 MOB2Q70IA6 237 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 IL31RAQ8NI17 732 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 SLC35G2Q8TBE7 412 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 ZNF564Q8TBZ8 553 aaPredicted RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 MMP19Q99542 508 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 STMN4Q9H169 189 aaPredicted RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
DDR1-223ENST00000324771 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
DDR1-223ENST00000324771 ASTN2O75129 1339 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms