RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 CA4P22748 312 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 NR2F2P24468 414 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 COPB1P53618 953 aaKnown RBP7.96□□□□□ -1.13
USP9X-201ENST00000324545 TRIM69Q86WT6 500 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 SH2D3AQ9BRG2 576 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 NPHP3-ACAD11A0A0J9YXS1 232 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 SEPT2Q15019 361 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 SH3GL1Q99961 368 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 LARSQ9P2J5 1176 aaKnown RBP7.96□□□□□ -1.13
USP9X-201ENST00000324545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.96□□□□□ -1.133e-9■■■■■ 35.5
USP9X-201ENST00000324545 A0A0D9SFI3 127 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 NFICP08651 508 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 STAT3P40763 770 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 RPS7P62081 194 aaKnown RBP7.96□□□□□ -1.13
USP9X-201ENST00000324545 RNF19BQ6ZMZ0 732 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 CNBD2Q96M20 576 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 TRIM15Q9C019 465 aa7.96□□□□□ -1.13
USP9X-201ENST00000324545 AARSP49588 968 aaKnown RBP eCLIP7.96□□□□□ -1.14
USP9X-201ENST00000324545 C11orf88Q6PI97 169 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 PPP1R13BQ96KQ4 1090 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 LOXHD1Q8IVV2 1947 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 M0QYV0 167 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 PPP6R2O75170 966 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 HSPA6P17066 643 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 SYTL3Q4VX76 610 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 KIAA1755Q5JYT7 1200 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 CATSPER4Q7RTX7 472 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 MFN1Q8IWA4 741 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 SNX5Q9Y5X3 404 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 CACNA1EQ15878 2313 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 ARF4P18085 180 aaPredicted RBP7.96□□□□□ -1.14
USP9X-201ENST00000324545 RGS7P49802 495 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 SRRM1Q8IYB3 904 aaKnown RBP7.96□□□□□ -1.14
USP9X-201ENST00000324545 NT5C1BQ96P26 610 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 NUP85Q9BW27 656 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 ABCB11O95342 1321 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 IQCF2Q8IXL9 164 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 KRT87PA6NCN2 255 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 GSTM1P09488 218 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 GRIK1P39086 918 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 INAQ16352 499 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 ACAD11Q709F0 780 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 VPS50Q96JG6 964 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 CLMNQ96JQ2 1002 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 PRG3Q9Y2Y8 225 aaPredicted RBP7.96□□□□□ -1.14
USP9X-201ENST00000324545 TMCC1O94876 653 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 ATP6V1B1P15313 513 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 MIIPQ5JXC2 388 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 SAAL1Q96ER3 474 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 UNKQ9C0B0 810 aaKnown RBP7.96□□□□□ -1.14
USP9X-201ENST00000324545 MRPL11Q9Y3B7 192 aaKnown RBP7.96□□□□□ -1.14
USP9X-201ENST00000324545 KDM3AQ9Y4C1 1321 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 KIF1BO60333 1816 aa7.96□□□□□ -1.14
USP9X-201ENST00000324545 NCAPD3P42695 1498 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 DNAJC3Q13217 504 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 RABL6Q3YEC7 729 aaPredicted RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 CCDC149Q6ZUS6 474 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 CCDC103Q8IW40 242 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 OR8K1Q8NGG5 319 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SPRTNQ9H040 489 aaPredicted RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 KLHL25Q9H0H3 589 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 KCNQ3O43525 872 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 CYP19A1P11511 503 aaPredicted RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 FGFR4P22455 802 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 NFIL3Q16649 462 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 RD3Q7Z3Z2 195 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 MYRIPQ8NFW9 859 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SNX24Q9Y343 169 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 TAC1P20366 129 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 HIBCHQ6NVY1 386 aaPredicted RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 AIFM3Q96NN9 605 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SH3GL2Q99962 352 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SPATA2Q9UM82 520 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 POLR2BP30876 1174 aaKnown RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 CLCN1P35523 988 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 PSMC6P62333 389 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 TRIP4Q15650 581 aaPredicted RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 MTERF3Q96E29 417 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SUN2Q9UH99 717 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 MAP3K5Q99683 1374 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SH3TC1Q8TE82 1336 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SMARCA1P28370 1054 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 DNAJC10Q8IXB1 793 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 PNMA1Q8ND90 353 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 ROGDIQ9GZN7 287 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 MAFFQ9ULX9 164 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 PRKAB2O43741 272 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 CEBPGP53567 150 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 PATL1Q86TB9 770 aaKnown RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 MS4A14Q96JA4 679 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 KIFC3Q9BVG8 833 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SMARCAD1Q9H4L7 1026 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 ZBTB22O15209 634 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 H2AFZP0C0S5 128 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 ST13P50502 369 aaKnown RBP7.95□□□□□ -1.14
USP9X-201ENST00000324545 KRT72Q14CN4 511 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 H2AFVQ71UI9 128 aa7.95□□□□□ -1.14
USP9X-201ENST00000324545 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms