RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 TMEM47Q9BQJ4 181 aa20.22■□□□□ 0.83
UBE2N-201ENST00000318066 WARS2Q9UGM6 360 aaKnown RBP20.22■□□□□ 0.83
UBE2N-201ENST00000318066 ARL2BPQ9Y2Y0 163 aa20.22■□□□□ 0.83
UBE2N-201ENST00000318066 GOLGA8IPA6NC78 632 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 RASSF10A6NK89 507 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 GOLGA8JA6NMD2 632 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 BARHL2Q9NY43 387 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 FEM1BQ9UK73 627 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 RNF103-CHMP3A0A140T963 221 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 SRGAP2O75044 1071 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 DDX5P17844 614 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 PDIA5Q14554 519 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 CCDC137Q6PK04 289 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 LRRC31Q6UY01 552 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 DTNBP1Q96EV8 351 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 TRPV6Q9H1D0 765 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 LY9Q9HBG7 655 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 SLC16A3O15427 465 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 DRAP1Q14919 205 aaPredicted RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 LLGL1Q15334 1064 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 KIAA1841Q6NSI8 718 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 THEM5Q8N1Q8 247 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 INTS2Q9H0H0 1204 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 DNAJC17Q9NVM6 304 aaKnown RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 MEFVO15553 781 aaPredicted RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 KRT14P02533 472 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 NPR1P16066 1061 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 PARD3BQ8TEW8 1205 aa20.21■□□□□ 0.83
UBE2N-201ENST00000318066 ZBTB12Q9Y330 459 aaPredicted RBP20.21■□□□□ 0.83
UBE2N-201ENST00000318066 SAMD9LQ8IVG5 1584 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 PDXKO00764 312 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 MTMR1Q13613 665 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 PPP6R3Q5H9R7 873 aaPredicted RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 CEP70Q8NHQ1 597 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 SNX12Q9UMY4 172 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 PRDM15P57071 1507 aaPredicted RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 CLRN2A0PK11 232 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 MAP3K10Q02779 954 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 HEATR6Q6AI08 1181 aaKnown RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 DHX40Q8IX18 779 aaKnown RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 ECT2Q9H8V3 914 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 KLC4Q9NSK0 619 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 PNMA3Q9UL41 463 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 TRIM49BA6NDI0 452 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 NOP14P78316 857 aaKnown RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 CCDC144BQ3MJ40 725 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 RCSD1Q6JBY9 416 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 NFRKBQ6P4R8 1299 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 C16orf87Q6PH81 154 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 FRA10AC1Q70Z53 315 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 NCLNQ969V3 563 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 CCSER1Q9C0I3 900 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 DDX47Q9H0S4 455 aaKnown RBP20.2■□□□□ 0.82
UBE2N-201ENST00000318066 H0Y3Z8 333 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 ORC4O43929 436 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 STAG2Q8N3U4 1231 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 KCTD17Q8N5Z5 321 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 ATL2Q8NHH9 583 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 FSD1LQ9BXM9 530 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 VPS11Q9H270 941 aa20.2■□□□□ 0.82
UBE2N-201ENST00000318066 FTLP02792 175 aaPredicted RBP20.19■□□□□ 0.82
UBE2N-201ENST00000318066 EIF2AK2P19525 551 aaKnown RBP20.19■□□□□ 0.82
UBE2N-201ENST00000318066 MTHFD1LQ6UB35 978 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 AGGF1Q8N302 714 aaeCLIP20.19■□□□□ 0.82
UBE2N-201ENST00000318066 FAM129AQ9BZQ8 928 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 CHCHD3Q9NX63 227 aaKnown RBP20.19■□□□□ 0.82
UBE2N-201ENST00000318066 H3BRJ5 948 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 GNAT1P11488 350 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 GCLMP48507 274 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 STXBP2Q15833 593 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 SGSM3Q96HU1 749 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 ZBBXA8MT70 800 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 PIK3R2O00459 728 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 SCARA5Q6ZMJ2 495 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 PPM1NQ8N819 430 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 ARMC2Q8NEN0 867 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 BEST2Q8NFU1 509 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 UVRAGQ9P2Y5 699 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 PYGLP06737 847 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 QARSP47897 775 aaKnown RBP20.19■□□□□ 0.82
UBE2N-201ENST00000318066 BCAR1P56945 870 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 KIAA1755Q5JYT7 1200 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 TMCO5AQ8N6Q1 288 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 FAM161BQ96MY7 647 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 C11orf70Q9BRQ4 267 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 EPN3Q9H201 632 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 UTYO14607 1347 aa20.19■□□□□ 0.82
UBE2N-201ENST00000318066 ARHGEF9O43307 516 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 ROR1Q01973 937 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 DNAL1Q4LDG9 190 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 TMEM270Q6UE05 265 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 GCNAQ96QF7 691 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 STAT3P40763 770 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 CAPRIN2Q6IMN6 1127 aaKnown RBP20.18■□□□□ 0.82
UBE2N-201ENST00000318066 CATSPER4Q7RTX7 472 aa20.18■□□□□ 0.82
UBE2N-201ENST00000318066 RTKN2Q8IZC4 609 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms