RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TTC17Q96AE7 1141 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 BRIP1Q9BX63 1249 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 PSTPIP2Q9H939 334 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 ATP6V0A4Q9HBG4 840 aa8.09□□□□□ -1.11
CDHR3-201ENST00000317716 RFX7Q2KHR2 1363 aa8.09□□□□□ -1.12
CDHR3-201ENST00000317716 CFAP73A6NFT4 308 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 FAM196BA6NMK8 535 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 ESRRAP11474 423 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 ITGB3BPQ13352 177 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 GRAPQ13588 217 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PKN1Q16512 942 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KIAA1755Q5JYT7 1200 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 NT5DC1Q5TFE4 455 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 LRRC43Q8N309 656 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 GRAPLQ8TC17 118 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 FAM161BQ96MY7 647 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 SH3GL2Q99962 352 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 RIC8AQ9NPQ8 531 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PCDHA6Q9UN73 950 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PCDHA8Q9Y5H6 950 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 BRWD3Q6RI45 1802 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 TRAPPC3O43617 180 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 GNA14O95837 355 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KCNA3P22001 575 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 EPHB1P54762 984 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KLC1Q07866 573 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 NAB2Q15742 525 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 SPATA24Q86W54 205 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 JAMLQ86YT9 394 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 FAM178BQ8IXR5 827 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KIFAP3Q92845 792 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 CAVIN3Q969G5 261 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 BTBD6Q96KE9 485 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 RUNDC3BQ96NL0 473 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 MTRQ99707 1265 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 NPHS2Q9NP85 383 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KLHL11Q9NVR0 708 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 SUGT1Q9Y2Z0 365 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 MYH14Q7Z406 1995 aaKnown RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 MAPK13O15264 365 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 MAP3K7O43318 606 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 BCRP11274 1271 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 NPR1P16066 1061 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PBX1P40424 430 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 BTKQ06187 659 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 STRN3Q13033 797 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 DRAP1Q14919 205 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 GRAMD1BQ3KR37 738 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 C2CD6Q53TS8 623 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 EPM2AIP1Q7L775 607 aaPredicted RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 WDR66Q8TBY9 1149 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 ELMO3Q96BJ8 720 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 AK8Q96MA6 479 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 KCNQ5Q9NR82 932 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 PAPOLBQ9NRJ5 636 aaKnown RBP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 ZFP69BQ9UJL9 534 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.08□□□□□ -1.12
CDHR3-201ENST00000317716 UTYO14607 1347 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
CDHR3-201ENST00000317716 RGPD1P0DJD0 1748 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PXDNLA1KZ92 1463 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CCDC195A0A1B0GUA6 201 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ARHGEF35A5YM69 484 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 STXBP3O00186 592 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 FERP16591 822 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 SLC8A3P57103 927 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 KCNMA1Q12791 1236 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TROAPQ12815 778 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ODR4Q5SWX8 454 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TMED8Q6PL24 325 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CROCCP2Q86T23 111 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 SLC35G2Q8TBE7 412 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 NAF1Q96HR8 494 aaKnown RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ERGIC2Q96RQ1 377 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TMEM47Q9BQJ4 181 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ANKRD2Q9GZV1 360 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ZFATQ9P243 1243 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PPP1R9AQ9ULJ8 1098 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ARL2BPQ9Y2Y0 163 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CNTNAP5Q8WYK1 1306 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PIAS1O75925 651 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 PLS3P13797 630 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 UCHL3P15374 230 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 COPS2P61201 443 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 MYL7Q01449 175 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CDR2Q01850 454 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 TTLL12Q14166 644 aaPredicted RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ANKRD20A2Q5SQ80 823 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ANKRD20A1Q5TYW2 823 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ANKRD35Q8N283 1001 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 GUF1Q8N442 669 aaKnown RBP8.07□□□□□ -1.12
CDHR3-201ENST00000317716 CCDC110Q8TBZ0 833 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 MORC4Q8TE76 937 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 DNAJC9Q8WXX5 260 aa8.07□□□□□ -1.12
CDHR3-201ENST00000317716 ATG4AQ8WYN0 398 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms