RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PALB2Q86YC2 1186 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 MYCT1Q8N699 235 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 CRAMP1Q96RY5 1269 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 SEL1LQ9UBV2 794 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 TPX2Q9ULW0 747 aaKnown RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 PCDHA3Q9Y5H8 950 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 ALG6Q9Y672 507 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 RBBP6Q7Z6E9 1792 aaKnown RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 MGRN1O60291 552 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 AGTP01019 485 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 GSTA1P08263 222 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 SLURP2P0DP57 97 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 ALAS1P13196 640 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 CTNNA2P26232 953 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 ZNF131P52739 623 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 NEDD9Q14511 834 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 COG2Q14746 738 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 TNFAIP8L3Q5GJ75 292 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 APOBEC3HQ6NTF7 200 aaKnown RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 ADAT2Q7Z6V5 191 aaKnown RBP20.64■□□□□ 0.89
RTN4-201ENST00000317610 FBXO11Q86XK2 927 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 PRELID2Q8N945 189 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 PARVGQ9HBI0 331 aa20.64■□□□□ 0.89
RTN4-201ENST00000317610 PFASO15067 1338 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 PODXLO00592 558 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 GGPS1O95749 300 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 MYL7Q01449 175 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 ADCY2Q08462 1091 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 C6orf118Q5T5N4 469 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 BTNL9Q6UXG8 535 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 AGPAT1Q99943 283 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 GOPCQ9HD26 462 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 AGPAT3Q9NRZ7 376 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 PARP2Q9UGN5 583 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 TRPC6Q9Y210 931 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 FRMD4BQ9Y2L6 1034 aa20.63■□□□□ 0.89
RTN4-201ENST00000317610 IGLV3-22A0A075B6J6 115 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 OPLAHO14841 1288 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 NFIAQ12857 509 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 SLC29A2Q14542 456 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 HS2ST1Q7LGA3 356 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 ZNF720Q7Z2F6 126 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 LMO3Q8TAP4 145 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 CYP2W1Q8TAV3 490 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 C18orf8Q96DM3 657 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 AZI2Q9H6S1 392 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 TMOD4Q9NZQ9 345 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 UBAP1LF5GYI3 381 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 RGS16O15492 202 aaPredicted RBP20.62■□□□□ 0.89
RTN4-201ENST00000317610 ADRA2BP18089 450 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 ANKS4BQ8N8V4 417 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 PIGOQ8TEQ8 1089 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 ZSWIM1Q9BR11 485 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 SLC12A4Q9UP95 1085 aa20.62■□□□□ 0.89
RTN4-201ENST00000317610 RAD21O60216 631 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SLITRK3O94933 977 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SERPINB2P05120 415 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 TRIM49P0CI25 452 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 TRIM49CP0CI26 452 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 RPL21P46778 160 aaKnown RBP20.61■□□□□ 0.89
RTN4-201ENST00000317610 VPS72Q15906 364 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SHROOM1Q2M3G4 852 aaPredicted RBP20.61■□□□□ 0.89
RTN4-201ENST00000317610 PHLDB3Q6NSJ2 640 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SLC9A9Q8IVB4 645 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 ZFPM1Q8IX07 1006 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 UBL4BQ8N7F7 174 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 GMCL1P1Q8NEA9 526 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 RPS6KC1Q96S38 1066 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SELENOSQ9BQE4 189 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.61■□□□□ 0.89
RTN4-201ENST00000317610 PIK3CDO00329 1044 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 FOXN3O00409 490 aaPredicted RBP20.61■□□□□ 0.89
RTN4-201ENST00000317610 SNAP25P60880 206 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 IFI35P80217 286 aaPredicted RBP20.61■□□□□ 0.89
RTN4-201ENST00000317610 CYP1B1Q16678 543 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 NBPF9Q3BBW0 867 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 AADACL2Q6P093 401 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 STXBP4Q6ZWJ1 553 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 OTOP1Q7RTM1 612 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 GMCL1Q96IK5 515 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 SEMA4AQ9H3S1 761 aa20.61■□□□□ 0.89
RTN4-201ENST00000317610 MTRF1LQ9UGC7 380 aaKnown RBP20.61■□□□□ 0.89
RTN4-201ENST00000317610 KRT13P13646 458 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 SCNN1DP51172 638 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 BFSP1Q12934 665 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 USH1GQ495M9 461 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 TTC27Q6P3X3 843 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 SP8Q8IXZ3 490 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 ZDHHC14Q8IZN3 488 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 KRT35Q92764 455 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 VTI1AQ96AJ9 217 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 RIMBP2O15034 1052 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 MUTP22033 750 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 PEX5P50542 639 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 CYP2J2P51589 502 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 PPP2R5CQ13362 524 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 MYBPC2Q14324 1141 aa20.6■□□□□ 0.89
RTN4-201ENST00000317610 ARHGAP44Q17R89 818 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms