RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PRELID2Q8N945 189 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ZNF570Q96NI8 536 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 TGS1Q96RS0 853 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 TRIM4Q9C037 500 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ZHX3Q9H4I2 956 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SUDS3Q9H7L9 328 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GRHL1Q9NZI5 618 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ASAP1Q9ULH1 1129 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 AGAP1Q9UPQ3 857 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MAGEB2O15479 319 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ECE2O60344 883 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ABHD2P08910 425 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CYP11B2P19099 503 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 VHLP40337 213 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 AP3B2Q13367 1082 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GSTA3Q16772 222 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CCDC89Q8N998 374 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SLC30A5Q8TAD4 765 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SLC35G2Q8TBE7 412 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 PHACTR1Q9C0D0 580 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 LRRC19Q9H756 370 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 OLFML3Q9NRN5 406 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 NDUFA13Q9P0J0 144 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GCNT4Q9P109 453 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SEL1LQ9UBV2 794 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 BIN2Q9UBW5 565 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GTF3C4Q9UKN8 822 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 KIAA1024Q9UPX6 916 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 STK38LQ9Y2H1 464 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RTCBQ9Y3I0 505 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 FAM47DPA6NHR8 397 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 DDX3YO15523 660 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RPS6KA3P51812 740 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RAD23BP54727 409 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RPS8P62241 208 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GPC5P78333 572 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RRP1BQ14684 758 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RASA2Q15283 850 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MUM1Q2TAK8 710 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CWF19L1Q69YN2 538 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 FAM186BQ8IYM0 893 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 TTC25Q96NG3 672 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 PIGSQ96S52 555 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 EPB41L4BQ9H329 900 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ASIC3Q9UHC3 531 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 GSTTP1A0A1W2PQM5 241 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SMIM23A6NLE4 172 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 LDHBP07195 334 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 TROVE2P10155 538 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 VCAM1P19320 739 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 PTPN4P29074 926 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RPUSD2Q8IZ73 545 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 DDX25Q9UHL0 483 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 NIP7Q9Y221 180 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 NVLO15381 856 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ECM2O94769 699 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SPARCL1Q14515 664 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SH2D4BQ5SQS7 431 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 CFAP57Q96MR6 1250 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MMADHCQ9H3L0 296 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 IL17RBQ9NRM6 502 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 DNAJC12Q9UKB3 198 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 EIF3DO15371 548 aaKnown RBP eCLIP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SPOPO43791 374 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 MTA2O94776 668 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 NTSR2O95665 410 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 SETSIPP0DME0 302 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 COILP38432 576 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 JAM2P57087 298 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 KPNB1Q14974 876 aaKnown RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 DCAF17Q5H9S7 520 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RELL1Q8IUW5 271 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 RBBP8NLQ8NC74 664 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 ASAP3Q8TDY4 903 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 NR1H4Q96RI1 486 aaPredicted RBP5.13□□□□□ -1.59
PTPN13-201ENST00000316707 EYA3Q99504 573 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 TRAIPQ9BWF2 469 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 USP20Q9Y2K6 914 aa5.13□□□□□ -1.59
PTPN13-201ENST00000316707 UBE4BO95155 1302 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MAGEA13PA6NCF6 341 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SNAP23O00161 211 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 NKRFO15226 690 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 RASA1P20936 1047 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PEX5P50542 639 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 POLGP54098 1239 aaPredicted RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GNPTABQ3T906 1256 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PPP1R2P3Q6NXS1 205 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 KIRREL3Q8IZU9 778 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 LARGE2Q8N3Y3 721 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 LZICQ8WZA0 190 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 GLG1Q92896 1179 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 STMN2Q93045 179 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 FAM20AQ96MK3 541 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 MIS12Q9H081 205 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 SSU72Q9NP77 194 aaKnown RBP5.12□□□□□ -1.59
PTPN13-201ENST00000316707 PRKAG3Q9UGI9 489 aa5.12□□□□□ -1.59
PTPN13-201ENST00000316707 FRMD4BQ9Y2L6 1034 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms