RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 C8orf74Q6P047 294 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 C11orf74Q86VG3 221 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 SLC17A8Q8NDX2 589 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 DIS3LQ8TF46 1054 aaKnown RBP7.15□□□□□ -1.27
ZNF540-201ENST00000316433 CENPTQ96BT3 561 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 NAP1L4Q99733 375 aaKnown RBP7.15□□□□□ -1.27
ZNF540-201ENST00000316433 NAPBQ9H115 298 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 TPK1Q9H3S4 243 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 PLCB1Q9NQ66 1216 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 JADE2Q9NQC1 790 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 GDF3Q9NR23 364 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 EURLQ9NYK6 297 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 BTBD7Q9P203 1132 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 PLAGL2Q9UPG8 496 aa7.15□□□□□ -1.27
ZNF540-201ENST00000316433 EPN1Q9Y6I3 576 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-201ENST00000316433 KANSL1LA0AUZ9 987 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 IQCA1LA6NCM1 817 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CTNND1O60716 968 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SERPINB7O75635 380 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 POLR3DP05423 398 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 IDEP14735 1019 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CARSP49589 748 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SERPINB8P50452 374 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 FXR1P51114 621 aaKnown RBP eCLIP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 PPP4CP60510 307 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 LRRC63Q05C16 580 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 LRP8Q14114 963 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KPNB1Q14974 876 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ZC2HC1CQ53FD0 456 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 TTC38Q5R3I4 469 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC122Q5T0U0 273 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 GJC2Q5T442 439 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 WDR59Q6PJI9 974 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CREG2Q8IUH2 290 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 PIGOQ8TEQ8 1089 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 MPP4Q96JB8 637 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 OLFM3Q96PB7 478 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CNOT10Q9H9A5 744 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 DISC1Q9NRI5 854 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 FAIMQ9NVQ4 179 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 NMRK1Q9NWW6 199 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ATP6V0A2Q9Y487 856 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 PCDHB6Q9Y5E3 794 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 MROH7Q68CQ1 1323 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 LTBP4Q8N2S1 1624 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CCDC162PA2VCL2 907 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KRT86O43790 486 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 VAV1P15498 845 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CCNE1P24864 410 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 FXR2P51116 673 aaKnown RBP eCLIP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 GALK1P51570 392 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CSE1LP55060 971 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 HERVK_113P62684 666 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 PPIDQ08752 370 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SF3A3Q12874 501 aaKnown RBP eCLIP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 TTLL12Q14166 644 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SEPT7Q16181 437 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 METTL24Q5JXM2 366 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CENPPQ6IPU0 288 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CCSAPQ6IQ19 270 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 FBXO33Q7Z6M2 555 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ZC3H18Q86VM9 953 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 TTC39CQ8N584 583 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 NAT14Q8WUY8 206 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 PBKQ96KB5 322 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CEP295NLQ96MC4 621 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ELAC2Q9BQ52 826 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 GPHNQ9NQX3 736 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 A0A0A6YYK5 440 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 UNCXA6NJT0 531 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SIGLEC16A6NMB1 481 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 BTBD18B2RXH4 712 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KCNJ18B7U540 433 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 MTRF1O75570 445 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 NTSR2O95665 410 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 RPN1P04843 607 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ZBTB48P10074 688 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ATF3P18847 181 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 HSPA9P38646 679 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 VHLP40337 213 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 NPEPPSP55786 919 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 RTP1P59025 263 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ENPEPQ07075 957 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 TBL3Q12788 808 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 CYLC2Q14093 348 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KCNJ12Q14500 433 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KIF22Q14807 665 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 MAMSTRQ6ZN01 415 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 KRT27Q7Z3Y8 459 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 ZNF804AQ7Z570 1209 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 MYO1HQ8N1T3 1032 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SYMPKQ92797 1274 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 NUDCD1Q96RS6 583 aa7.14□□□□□ -1.27
ZNF540-201ENST00000316433 DDX23Q9BUQ8 820 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 SAMSN1Q9NSI8 373 aaKnown RBP7.14□□□□□ -1.27
ZNF540-201ENST00000316433 GINM1Q9NU53 330 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms