RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 CYB5D1Q6P9G0 228 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 IYDQ6PHW0 289 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 MTA3Q9BTC8 594 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 SHCBP1LQ9BZQ2 653 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 GJB4Q9NTQ9 266 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 DONSONQ9NYP3 566 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TMEM247A6NEH6 219 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 AIM2O14862 343 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 ARL4AP40617 200 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 PDCD6IPQ8WUM4 868 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 GNPATO15228 680 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TRABDQ9H4I3 376 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 KLHL11Q9NVR0 708 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 AMACRQ9UHK6 382 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 PPP6R2O75170 966 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 HIBADHP31937 336 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 ZNF786Q8N393 782 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TRIM51Q9BSJ1 452 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TEX12Q9BXU0 123 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TARSL2A2RTX5 802 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 ASPSCR1Q9BZE9 553 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 PIK3R2O00459 728 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 TSSK1BQ9BXA7 367 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 DNALI1O14645 258 aaPredicted RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 IL31Q6EBC2 164 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 CCDC137Q6PK04 289 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 AHI1Q8N157 1196 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 MTERF3Q96E29 417 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 HEXIM2Q96MH2 286 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 CAAP1Q9H8G2 361 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 EXOSC4Q9NPD3 245 aaKnown RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 ETAA1Q9NY74 926 aa9.27□□□□□ -0.93
USF3-201ENST00000316407 NFKBIL1Q9UBC1 381 aaPredicted RBP9.27□□□□□ -0.93
USF3-201ENST00000316407 AKIRIN2Q53H80 203 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 ARHGAP22Q7Z5H3 698 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 M0QZ92 97 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 AKR1B1P15121 316 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 ISLR2Q6UXK2 745 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 NSMCE4AQ9NXX6 385 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TTLL7Q6ZT98 887 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 CFAP74Q9C0B2 1584 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 RNF103O00237 685 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 ZCWPW2Q504Y3 356 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 MTRQ99707 1265 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 ARHGEF3Q9NR81 526 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 MXD4Q14582 209 aaPredicted RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 USP40Q9NVE5 1235 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 SEPT3Q9UH03 358 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 PLXNC1O60486 1568 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 INPP5AQ14642 412 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 COBLL1Q53SF7 1204 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 LPIN2Q92539 896 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 SEL1LQ9UBV2 794 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 MAPRE1Q15691 268 aaKnown RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 LINC00301Q8NCQ3 95 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TAF4O00268 1085 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 IFNEQ86WN2 208 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TLR7Q9NYK1 1049 aaKnown RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 PPP2R5BQ15173 497 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TPTE2Q6XPS3 522 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 TTC25Q96NG3 672 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 CROCCQ5TZA2 2017 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 HORMAD1Q86X24 394 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 FOXP1Q9H334 677 aaPredicted RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 CCDC87Q9NVE4 849 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 KPNA7A9QM74 516 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 FKBP3Q00688 224 aaKnown RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 MRPL47Q9HD33 250 aaKnown RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 MRPL40Q9NQ50 206 aaKnown RBP9.26□□□□□ -0.93
USF3-201ENST00000316407 KMT5AQ9NQR1 393 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 GJA3Q9Y6H8 435 aa9.26□□□□□ -0.93
USF3-201ENST00000316407 A0A1B0GW55 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L2P0CJ85 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L3P0CJ86 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L4P0CJ87 422 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L5P0CJ88 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L6P0CJ89 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4L7P0CJ90 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 ARSEP51690 589 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 ARHGAP17Q68EM7 881 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 SPATA4Q8NEY3 305 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 DUX4Q9UBX2 424 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 PCDHA1Q9Y5I3 950 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 TLR3O15455 904 aaKnown RBP9.25□□□□□ -0.93
USF3-201ENST00000316407 BCAMP50895 628 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 NLRP9Q7RTR0 991 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 CNDP1Q96KN2 507 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 GPR141Q7Z602 305 aa9.25□□□□□ -0.93
USF3-201ENST00000316407 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.25□□□□□ -0.93
USF3-201ENST00000316407 AFF4Q9UHB7 1163 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms