RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 LPPQ93052 612 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 NFKBIZQ9BYH8 718 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 FAM105AQ9NUU6 356 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 DACT1Q9NYF0 836 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 PCDHGC5Q9Y5F6 944 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 MUTP22033 750 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 PBX3P40426 434 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 AFF1P51825 1210 aaKnown RBP16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 GNL2Q13823 731 aaKnown RBP16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 PDIA5Q14554 519 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 MXD4Q14582 209 aaPredicted RBP16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 RILPL1Q5EBL4 403 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 CDCA2Q69YH5 1023 aaPredicted RBP16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 CATSPER4Q7RTX7 472 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 ADGRD2Q7Z7M1 963 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 HELQQ8TDG4 1101 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 POF1BQ8WVV4 589 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 POLR3FQ9H1D9 316 aaPredicted RBP16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 SMC3Q9UQE7 1217 aa16.24■□□□□ 0.19
PPP1CA-201ENST00000312989 LAD1O00515 517 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 FSCN2O14926 492 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 HOXA2O43364 376 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 EDN1P05305 212 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 GTF2F1P35269 517 aaKnown RBP eCLIP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 TWF2Q6IBS0 349 aaKnown RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 KCNK18Q7Z418 384 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 LRRC43Q8N309 656 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 SMG8Q8ND04 991 aaKnown RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 ADAMTS19Q8TE59 1207 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 NECAB3Q96P71 396 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 LRWD1Q9UFC0 647 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.23■□□□□ 0.19
PPP1CA-201ENST00000312989 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 B4GALT5O43286 388 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 OFD1O75665 1012 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 FGF18O76093 207 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 CYP11B2P19099 503 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 CDC25AP30304 524 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 PLCB3Q01970 1234 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 DLX2Q07687 328 aaPredicted RBP16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 LEXMQ3ZCV2 418 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 HAUS3Q68CZ6 603 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 PADI6Q6TGC4 694 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 TMEM173Q86WV6 379 aaPredicted RBP16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 SLC39A11Q8N1S5 342 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 RNF169Q8NCN4 708 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 LRRC15Q8TF66 581 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 PABPC5Q96DU9 382 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 EIF2AQ9BY44 585 aaKnown RBP16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 PCDHB2Q9Y5E7 798 aa16.22■□□□□ 0.19
PPP1CA-201ENST00000312989 TTLL13PA6NNM8 815 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 INPPL1O15357 1258 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 LINC01565O15544 149 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 TBX10O75333 385 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 CSPG5O95196 566 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 ARF4P18085 180 aaPredicted RBP16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 LAG3P18627 525 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 RAB27AP51159 221 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 ERVFC1P60507 584 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 UBE3AQ05086 875 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 PCBP1Q15365 356 aaKnown RBP eCLIP16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 LONRF3Q496Y0 759 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 HYIQ5T013 277 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 KCNT2Q6UVM3 1135 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 MAEAQ7L5Y9 396 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 DAW1Q8N136 415 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 ERMNQ8TAM6 284 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 BCL7CQ8WUZ0 217 aaPredicted RBP16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 SYMPKQ92797 1274 aaKnown RBP16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 PNMA5Q96PV4 448 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 CCDC113Q9H0I3 377 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 KIAA1024Q9UPX6 916 aa16.21■□□□□ 0.19
PPP1CA-201ENST00000312989 GLP2RO95838 553 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 KCNA5P22460 613 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 PPP4R3CPQ6ZMV5 832 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 MCPH1Q8NEM0 835 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 CPB2Q96IY4 423 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 BHMT2Q9H2M3 363 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 RNF39Q9H2S5 420 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 FZD8Q9H461 694 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 DDX19AQ9NUU7 478 aaKnown RBP16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 TBC1D13Q9NVG8 400 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 PLXNA4Q9HCM2 1894 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 MYO7AQ13402 2215 aa16.2■□□□□ 0.18
PPP1CA-201ENST00000312989 BDP1A6H8Y1 2624 aa16.19■□□□□ 0.18
PPP1CA-201ENST00000312989 E9PMD0 336 aa16.19■□□□□ 0.18
PPP1CA-201ENST00000312989 H3BQV1 296 aa16.19■□□□□ 0.18
PPP1CA-201ENST00000312989 INO80B-WBP1J3KQ70 363 aa16.19■□□□□ 0.18
PPP1CA-201ENST00000312989 AXLP30530 894 aa16.19■□□□□ 0.18
PPP1CA-201ENST00000312989 GRIN1Q05586 938 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms