RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 LETM2Q2VYF4 491 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 IER5LQ5T953 404 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 PPP4R3AQ6IN85 833 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 EXOC8Q8IYI6 725 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 RNF169Q8NCN4 708 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 SMRP1Q8NCR6 262 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 PRSS33Q8NF86 280 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 ZNF558Q96NG5 402 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 CEP89Q96ST8 783 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 JPH2Q9BR39 696 aaPredicted RBP9.14□□□□□ -0.95
TPM3-203ENST00000312970 SH2D3AQ9BRG2 576 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 FDXACB1Q9BRP7 624 aaPredicted RBP9.14□□□□□ -0.95
TPM3-203ENST00000312970 PHF20Q9BVI0 1012 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 NGRNQ9NPE2 291 aaKnown RBP9.14□□□□□ -0.95
TPM3-203ENST00000312970 RNF19AQ9NV58 838 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 SPG21Q9NZD8 308 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 SUCLA2Q9P2R7 463 aaPredicted RBP9.14□□□□□ -0.95
TPM3-203ENST00000312970 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
TPM3-203ENST00000312970 TMEM150BA6NC51 233 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 TBX3O15119 743 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 SLC37A4O43826 429 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 MARCH6O60337 910 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 PFKFB2O60825 505 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 CSDE1O75534 798 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 GLP2RO95838 553 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 NEFLP07196 543 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 SRGAP2BP0DMP2 458 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 SKIP12755 728 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 GCFC2P16383 781 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 SFPQP23246 707 aaKnown RBP eCLIP9.13□□□□□ -0.95
TPM3-203ENST00000312970 QARSP47897 775 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 ALDH7A1P49419 539 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 SCRN1Q12765 414 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 PPP2R5CQ13362 524 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 DRP2Q13474 957 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 ANKRD1Q15327 319 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 DUSP6Q16828 381 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 HERC4Q5GLZ8 1057 aaPredicted RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 CLLU1OSQ5K130 101 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 TMEM184AQ6ZMB5 413 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 ANO5Q75V66 913 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 TMC7Q7Z402 723 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 NEK8Q86SG6 692 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 ZNF598Q86UK7 904 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 ZNF410Q86VK4 478 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 RHPN2Q8IUC4 686 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 LRRC43Q8N309 656 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 RSPH1Q8WYR4 309 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 NAP1L4Q99733 375 aaKnown RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 ENTPD7Q9NQZ7 604 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 TPCN1Q9ULQ1 816 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 BARX2Q9UMQ3 279 aaPredicted RBP9.13□□□□□ -0.95
TPM3-203ENST00000312970 DNAH14Q0VDD8 3507 aa9.13□□□□□ -0.95
TPM3-203ENST00000312970 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 LOC730098B7Z3J9 87 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 EML1O00423 815 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 ST18O60284 1047 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 CCNT1O60563 726 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 BAG4O95429 457 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 PHKA2P46019 1235 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 ANAPC15P60006 121 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 RBM10P98175 930 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 KCNA1Q09470 495 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 KCNC3Q14003 757 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 BMS1Q14692 1282 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 PLPP4Q5VZY2 271 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 OTUD6AQ7L8S5 288 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 MRPL43Q8N983 215 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 HELQQ8TDG4 1101 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 SLC7A3Q8WY07 619 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 WASF1Q92558 559 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 EDAQ92838 391 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 CEP170P1Q96L14 293 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 TCF25Q9BQ70 676 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 PHF7Q9BWX1 381 aaPredicted RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 MRPL9Q9BYD2 267 aaKnown RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 KCNMB3Q9NPA1 279 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 MUTYHQ9UIF7 546 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 USP15Q9Y4E8 981 aaPredicted RBP9.12□□□□□ -0.95
TPM3-203ENST00000312970 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
TPM3-203ENST00000312970 STK36Q9NRP7 1315 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 FAM186AA6NE01 2351 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 HIDE1A8MVS5 230 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 ZNF623O75123 536 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 CTDNEP1O95476 244 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 CXCL14O95715 111 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 HOXB8P17481 243 aaPredicted RBP9.11□□□□□ -0.95
TPM3-203ENST00000312970 FECHP22830 423 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 PBX3P40426 434 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 RFC5P40937 340 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 TECP42680 631 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 NPEPPSP55786 919 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 BCAR1P56945 870 aa9.11□□□□□ -0.95
TPM3-203ENST00000312970 SMC1AQ14683 1233 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms