RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ARL1P40616 181 aaPredicted RBP12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF699Q32M78 642 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 PLA2G4FQ68DD2 849 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 TTC19Q6DKK2 380 aaPredicted RBP12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 PASD1Q8IV76 773 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 C11orf70Q9BRQ4 267 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 MKNK1Q9BUB5 465 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 CALN1Q9BXU9 219 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 KCNQ5Q9NR82 932 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 ANAPC5Q9UJX4 755 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 FHOD1Q9Y613 1164 aa12.27□□□□□ -0.45
PCDHGC3-201ENST00000308177 SYNJ2BP-COX16A0A087WUM0 186 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 TM4SF1P30408 202 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 XRRA1Q6P2D8 792 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 PDZD4Q76G19 769 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 SPATA4Q8NEY3 305 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 NACA2Q9H009 215 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 IFT122Q9HBG6 1241 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 COX16Q9P0S2 106 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 GGPS1O95749 300 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 VEGFAP15692 232 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 DYNLT1P63172 113 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 CENPPQ6IPU0 288 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 VSIG1Q86XK7 387 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 REXO1L1PQ8IX06 675 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF564Q8TBZ8 553 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 EXOC4Q96A65 974 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 CALR3Q96L12 384 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 NNTQ13423 1086 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 SLMAPQ14BN4 828 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 SCYL3Q8IZE3 742 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 MOV10L1Q9BXT6 1211 aaKnown RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 ANXA13P27216 316 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 NPEPPSP55786 919 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 KCNV1Q6PIU1 500 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 CEP57Q86XR8 500 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 KSR1Q8IVT5 923 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 CCDC117Q8IWD4 279 aaPredicted RBP12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 AGPAT1Q99943 283 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 RUSC1Q9BVN2 902 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 NUP85Q9BW27 656 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 PLAGL2Q9UPG8 496 aa12.26□□□□□ -0.45
PCDHGC3-201ENST00000308177 GRID2IPA4D2P6 1211 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 EFNA5P52803 228 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 TRIP13Q15645 432 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 FAM83AQ86UY5 434 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 TMEM143Q96AN5 459 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 DDX47Q9H0S4 455 aaKnown RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 PODXLO00592 558 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 EVI5O60447 810 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF211Q13398 564 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 SNRNP35Q16560 246 aaKnown RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 GKAP1Q5VSY0 366 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 LMBRD2Q68DH5 695 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 CYP4F22Q6NT55 531 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 NME8Q8N427 588 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 RNF149Q8NC42 400 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZKSCAN4Q969J2 545 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 SEMA6BQ9H3T3 888 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 UNC45AQ9H3U1 944 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 SNX24Q9Y343 169 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 PFASO15067 1338 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 UBE4BO95155 1302 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ASB14A6NK59 587 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 RSPH10B2B2RC85 870 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 MCF2LO15068 1137 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 CYP26A1O43174 497 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 RSPH10BP0C881 870 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 TXNP10599 105 aaKnown RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 GPC3P51654 580 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 EVX2Q03828 476 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 GABPB2Q8TAK5 448 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 LMO7Q8WWI1 1683 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 SEPT1Q8WYJ6 367 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 POC1B-GALNT4F8VUJ3 575 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 BUB1BO60566 1050 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ARP10275 920 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 IFRD2Q12894 506 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 GSPT2Q8IYD1 628 aaKnown RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 CERS5Q8N5B7 392 aa12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 ZNF526Q8TF50 670 aaPredicted RBP12.25□□□□□ -0.45
PCDHGC3-201ENST00000308177 KIAA0391O15091 583 aaKnown RBP12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 GNA15P30679 374 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 ERVK-24P63145 666 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 PRKCEQ02156 737 aa12.24□□□□□ -0.45
PCDHGC3-201ENST00000308177 Q4G0T1 1027 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms