RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 DGAT1O75907 488 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 ERLIN2O94905 339 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 SPATA31C1P0DKV0 1188 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 ORC2Q13416 577 aaPredicted RBP18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 POTEGQ6S5H5 508 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 KCNT2Q6UVM3 1135 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 CATSPER3Q86XQ3 398 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 ASAP3Q8TDY4 903 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 ZNF558Q96NG5 402 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 TUFT1Q9NNX1 390 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 TLR9Q9NR96 1032 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 PLXNA4Q9HCM2 1894 aa18.96■□□□□ 0.63
HMGCLL1-202ENST00000308161 INO80B-WBP1J3KQ70 363 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 LINC01565O15544 149 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 SKIP12755 728 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 IL9P15248 144 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 NRIP1P48552 1158 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 TRAPPC10P48553 1259 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 TFDP1Q14186 410 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 MXD4Q14582 209 aaPredicted RBP18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 CSPP1Q1MSJ5 1256 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 GLB1LQ6UWU2 654 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 TBC1D32Q96NH3 1257 aa18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 MRPL9Q9BYD2 267 aaKnown RBP18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 POLR3FQ9H1D9 316 aaPredicted RBP18.95■□□□□ 0.62
HMGCLL1-202ENST00000308161 MEIS3P2A8K0S8 358 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 H3BQV1 296 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 NCK2O43639 380 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 U2AF2P26368 475 aaKnown RBP eCLIP18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 GJB2P29033 226 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 NDUFV1P49821 464 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 RAB27AP51159 221 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 UBE3AQ05086 875 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 DLX2Q07687 328 aaPredicted RBP18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 CAPSQ13938 189 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 PLPP4Q5VZY2 271 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 NACC1Q96RE7 527 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 TLE6Q9H808 572 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 GPRC5CQ9NQ84 441 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 PCDHB6Q9Y5E3 794 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 PCDHB2Q9Y5E7 798 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 NCOR1O75376 2440 aa18.94■□□□□ 0.62
HMGCLL1-202ENST00000308161 BDP1A6H8Y1 2624 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 NT5C1B-RDH14C9J2C7 533 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 ZC3H11AO75152 810 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 PPM1AP35813 382 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 LTBRP36941 435 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 CCT6AP40227 531 aaKnown RBP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 TOB1P50616 345 aaPredicted RBP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 PTENP60484 403 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 ERVFC1P60507 584 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 PTGDRQ13258 359 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 HAUS3Q68CZ6 603 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 MRPS27Q92552 414 aaKnown RBP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 PGBD4Q96DM1 585 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 CPB2Q96IY4 423 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 POLR3CQ9BUI4 534 aaPredicted RBP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 TRAIPQ9BWF2 469 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 GBP3Q9H0R5 595 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 ENTPD7Q9NQZ7 604 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 SPG21Q9NZD8 308 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 PUF60Q9UHX1 559 aaKnown RBP18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 SMC3Q9UQE7 1217 aa18.93■□□□□ 0.62
HMGCLL1-202ENST00000308161 ARHGEF35A5YM69 484 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 LRRIQ4A6NIV6 560 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 PER2O15055 1255 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 TBX10O75333 385 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 XRCC6P12956 609 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 GLRA2P23416 452 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 CA8P35219 290 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 ARL2P36404 184 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 MCM2P49736 904 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 KRT17Q04695 432 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 RNASELQ05823 741 aaKnown RBP18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 COL19A1Q14993 1142 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 NOMO2Q5JPE7 1267 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 TCF25Q9BQ70 676 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 LRWD1Q9UFC0 647 aa18.92■□□□□ 0.62
HMGCLL1-202ENST00000308161 GRXCR2A6NFK2 248 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 TSPAN1O60635 241 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 RPA1P27694 616 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 HOXA11P31270 313 aaPredicted RBP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 SSTR3P32745 418 aaPredicted RBP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 ALDH7A1P49419 539 aaKnown RBP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 FXR2P51116 673 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 BCAR1P56945 870 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 CTC1Q2NKJ3 1217 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 C4orf32Q8N8J7 132 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 TBC1D13Q9NVG8 400 aa18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 DBR1Q9UK59 544 aaKnown RBP18.91■□□□□ 0.62
HMGCLL1-202ENST00000308161 ZNF623O75123 536 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 OFD1O75665 1012 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 PLCB3Q01970 1234 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 MBTD1Q05BQ5 628 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 ADAM15Q13444 863 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 PUS10Q3MIT2 529 aaKnown RBP18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 UBXN11Q5T124 520 aa18.9■□□□□ 0.62
HMGCLL1-202ENST00000308161 NOTUMQ6P988 496 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms