RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SSH3Q8TE77 659 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 IRF1P10914 325 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 BRAFP15056 766 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 CENPAP49450 140 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 LMNB2Q03252 620 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 PCSK7Q16549 785 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 FAM83BQ5T0W9 1011 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 TTC25Q96NG3 672 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 TRAPPC8Q9Y2L5 1435 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 TYW5A2RUC4 315 aaKnown RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 ENO3P13929 434 aaPredicted RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 ZSCAN20P17040 1043 aaPredicted RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ELMO3Q96BJ8 720 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 PPP2R2AP63151 447 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 TM6SF1Q9BZW5 370 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 KLC4Q9NSK0 619 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 GIMAP4Q9NUV9 329 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 MAP3K6O95382 1288 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ADCY2Q08462 1091 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 SPDYAQ5MJ70 313 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ICE2Q659A1 982 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 PDXDC1Q6P996 788 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 EXOC4Q96A65 974 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 HMGB1P1B2RPK0 211 aaPredicted RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 KIZQ2M2Z5 673 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ALS2CLQ60I27 953 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 GSDMAQ96QA5 445 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ACTR5Q9H9F9 607 aaPredicted RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 DYTNA2CJ06 578 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 HAUS5O94927 633 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ATP6V1B1P15313 513 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 CCDC81Q6ZN84 652 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 FTLP02792 175 aaPredicted RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 PHKG2P15735 406 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 SCP2P22307 547 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 C1orf131Q8NDD1 294 aaKnown RBP13.45□□□□□ -0.26
USP38-201ENST00000307017 ADAM22Q9P0K1 906 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 SNX5Q9Y5X3 404 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
USP38-201ENST00000307017 EIF4G3O43432 1585 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 ANXA13P27216 316 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 AP2B1P63010 937 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 ARMC9Q7Z3E5 817 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 ZNF564Q8TBZ8 553 aaPredicted RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 MDM1Q8TC05 714 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 ABHD8Q96I13 439 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 CNOT10Q9H9A5 744 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 DCTN3O75935 186 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 RBM46Q8TBY0 533 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 LZICQ8WZA0 190 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 THAP9Q9H5L6 903 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 NFKBIL1Q9UBC1 381 aaPredicted RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 SESN2P58004 480 aaPredicted RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 TFDP1Q14186 410 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 DNAAF5Q86Y56 855 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 KIF28PB7ZC32 967 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 CTIFO43310 598 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 MED7O43513 233 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 TJP3O95049 919 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 FKBP3Q00688 224 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 ACAD11Q709F0 780 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 KCNF1Q9H3M0 494 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 ZBTB39O15060 712 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 RGS7P49802 495 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 CCDC142Q17RM4 750 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 MMS22LQ6ZRQ5 1243 aa13.44□□□□□ -0.26
USP38-201ENST00000307017 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 SRPRBQ9Y5M8 271 aaKnown RBP13.44□□□□□ -0.26
USP38-201ENST00000307017 VSNL1P62760 191 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 SMTNL2Q2TAL5 461 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 TAF1BQ53T94 588 aaPredicted RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 SRLQ86TD4 932 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CHP1Q99653 195 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 PTPRHQ9HD43 1115 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 COL17A1Q9UMD9 1497 aaPredicted RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 FAM95CA0A1B0GW59 222 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 PDE8BO95263 885 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CHN1P15882 459 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 ARFIP2P53365 341 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 RESP18Q5W5W9 173 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 CAPRIN2Q6IMN6 1127 aaKnown RBP13.43□□□□□ -0.26
USP38-201ENST00000307017 TRIM15Q9C019 465 aa13.43□□□□□ -0.26
USP38-201ENST00000307017 MRPL47Q9HD33 250 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms