RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 EXOC8Q8IYI6 725 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 KLHL23Q8NBE8 558 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 RNF149Q8NC42 400 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 SMG8Q8ND04 991 aaKnown RBP12.54□□□□□ -0.4
CLCC1-201ENST00000302500 SNX21Q969T3 373 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 PNMA5Q96PV4 448 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 LMAN2LQ9H0V9 348 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 TYW1Q9NV66 732 aaKnown RBP12.54□□□□□ -0.4
CLCC1-201ENST00000302500 RWDD3Q9Y3V2 267 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
CLCC1-201ENST00000302500 PDCD11Q14690 1871 aaKnown RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 CYP11B2P19099 503 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 CDC25AP30304 524 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 CTNNB1P35222 781 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 DNM2P50570 870 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 RESTQ13127 1097 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 MXD4Q14582 209 aaPredicted RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 PTPAQ15257 358 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 PAN2Q504Q3 1202 aaKnown RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 KCNN1Q92952 543 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 NACC1Q96RE7 527 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 C11orf84Q9BUA3 381 aaPredicted RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 FZD8Q9H461 694 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 FAM105AQ9NUU6 356 aa12.53□□□□□ -0.4
CLCC1-201ENST00000302500 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
CLCC1-201ENST00000302500 B4GALT5O43286 388 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 OFD1O75665 1012 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 KCNQ1P51787 676 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 PLCB3Q01970 1234 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 HYAL1Q12794 435 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 FAM187BQ17R55 369 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 TCEAL5Q5H9L2 206 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 TMEM173Q86WV6 379 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 BCL7CQ8WUZ0 217 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 PPM1EQ8WY54 764 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 LPPQ93052 612 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 VN1R3Q9BXE9 311 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 INO80BQ9C086 356 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 POLR3FQ9H1D9 316 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 DACT1Q9NYF0 836 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 LRWD1Q9UFC0 647 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 SMC3Q9UQE7 1217 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 MTMR6Q9Y217 621 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 PIN4Q9Y237 131 aaKnown RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.52□□□□□ -0.41
CLCC1-201ENST00000302500 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.41
CLCC1-201ENST00000302500 A0A1B0GUA9 196 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 MARCH6O60337 910 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 GLP2RO95838 553 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 SRGAP2CP0DJJ0 459 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 ARF4P18085 180 aaPredicted RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 SYT1P21579 422 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 GTF2F1P35269 517 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 ERVFC1P60507 584 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 DLX2Q07687 328 aaPredicted RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 PADI6Q6TGC4 694 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 C1orf186Q6ZWK4 172 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 ADGRD2Q7Z7M1 963 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 SLC39A11Q8N1S5 342 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 VN1R2Q8NFZ6 395 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 EIF2AQ9BY44 585 aaKnown RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 NSUN3Q9H649 340 aaKnown RBP12.51□□□□□ -0.41
CLCC1-201ENST00000302500 COG5Q9UP83 839 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 PCDHB2Q9Y5E7 798 aa12.51□□□□□ -0.41
CLCC1-201ENST00000302500 E9PMD0 336 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 K7ELQ4 463 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 ABLIM1O14639 778 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 TBX10O75333 385 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 FGF18O76093 207 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 ZSCAN20P17040 1043 aaPredicted RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 PBX3P40426 434 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 SLC12A3P55017 1021 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 MRPS5P82675 430 aaKnown RBP12.5□□□□□ -0.41
CLCC1-201ENST00000302500 UBE3AQ05086 875 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 NAB2Q15742 525 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 TIGD5Q53EQ6 642 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 HAUS3Q68CZ6 603 aa12.5□□□□□ -0.41
CLCC1-201ENST00000302500 CATSPER4Q7RTX7 472 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms