RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 GANQ9H2C0 597 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 EFCC1Q9HA90 598 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 VTA1Q9NP79 307 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 TBX20Q9UMR3 447 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 MYH9P35579 1960 aaKnown RBP13.12□□□□□ -0.31
TPM3-202ENST00000302206 EMSYQ7Z589 1322 aa13.12□□□□□ -0.31
TPM3-202ENST00000302206 SSU72P8A0A1W2PR75 194 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 EXOC3O60645 756 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 LCA5LO95447 670 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 TCF7P36402 384 aaPredicted RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 ARL2P36404 184 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 TM4SF4P48230 202 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 CYP2J2P51589 502 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 POLGP54098 1239 aaPredicted RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 SREBF2Q12772 1141 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 EMC2Q15006 297 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 EXOC3L4Q17RC7 722 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 FAM110CQ1W6H9 321 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 XXYLT1Q8NBI6 393 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 GPR20Q99678 358 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 POLR3FQ9H1D9 316 aaPredicted RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 AZI2Q9H6S1 392 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 NHEJ1Q9H9Q4 299 aaPredicted RBP13.11□□□□□ -0.31
TPM3-202ENST00000302206 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 MYO1AQ9UBC5 1043 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 IVNS1ABPQ9Y6Y0 642 aa13.11□□□□□ -0.31
TPM3-202ENST00000302206 DENND3A2RUS2 1198 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 LRRC53A6NM62 1247 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 CCDC169A6NNP5 214 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 KIAA0391O15091 583 aaKnown RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 PMM2O15305 246 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 P4HA2O15460 535 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 N4BP1O75113 896 aaKnown RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 IPO7O95373 1038 aaKnown RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 ARIH2O95376 493 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 KRT13P13646 458 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 PON1P27169 355 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 MAPK4P31152 587 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 NAMPTP43490 491 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 BFSP1Q12934 665 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 LY6KQ17RY6 165 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 BRDTQ58F21 947 aaPredicted RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 SFMBT2Q5VUG0 894 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 MAMDC4Q6UXC1 1216 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 SYT10Q6XYQ8 523 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
TPM3-202ENST00000302206 ANKRD13CQ8N6S4 541 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 HAUS4Q9H6D7 363 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 L2HGDHQ9H9P8 463 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 HSPBP1Q9NZL4 362 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 PLXNA1Q9UIW2 1896 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 BRCA2P51587 3418 aa13.1□□□□□ -0.31
TPM3-202ENST00000302206 UQCRHLA0A096LP55 91 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 MANSC4A6NHS7 340 aaPredicted RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 KIF5CO60282 957 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 SORBS3O60504 671 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 MAFO75444 373 aaPredicted RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 SERPING1P05155 500 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 UQCRHP07919 91 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 GARTP22102 1010 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 ANXA13P27216 316 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 ADORA2AP29274 412 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 ARHGAP25P42331 645 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 FMO5P49326 533 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 POLR2FP61218 127 aaKnown RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 IRF5Q13568 498 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 LAMC2Q13753 1193 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 GRB14Q14449 540 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 FBXO16Q8IX29 292 aaPredicted RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 TXLNBQ8N3L3 684 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 ACRBPQ8NEB7 543 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 ATP8B4Q8TF62 1192 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 ZNF592Q92610 1267 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 EMID1Q96A84 441 aaPredicted RBP13.09□□□□□ -0.31
TPM3-202ENST00000302206 VTI1AQ96AJ9 217 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 CCDC42Q96M95 316 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 PTPN18Q99952 460 aa13.09□□□□□ -0.31
TPM3-202ENST00000302206 JPH2Q9BR39 696 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms