RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 GAS8O95995 478 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 KCNMA1Q12791 1236 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 CCDC6Q16204 474 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 TTLL6Q8N841 843 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 hCG_1984214I3L0E3 225 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 MAPK4P31152 587 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 SLC35G1Q2M3R5 365 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 TAOK1Q7L7X3 1001 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 ZNF713Q8N859 430 aaPredicted RBP15.13■□□□□ 0.01
SDC2-201ENST00000302190 UBXN6Q9BZV1 441 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 ACP6Q9NPH0 428 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 PPP1R12AO14974 1030 aaPredicted RBP15.13■□□□□ 0.01
SDC2-201ENST00000302190 CYP26A1O43174 497 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 PPP4CP60510 307 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 PADI6Q6TGC4 694 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 CCDC13Q8IYE1 715 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 DAGLBQ8NCG7 672 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 LRRC15Q8TF66 581 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 LXNQ9BS40 222 aa15.13■□□□□ 0.01
SDC2-201ENST00000302190 LRRIQ4A6NIV6 560 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 KRT19P08727 400 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 KCNA3P22001 575 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 PON1P27169 355 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 POLD1P28340 1107 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 ECE1P42892 770 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 PPP2R2AP63151 447 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 CUL1Q13616 776 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 TRIM68Q6AZZ1 485 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 CCDC63Q8NA47 563 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 N4BP2L2Q92802 583 aaPredicted RBP15.12■□□□□ 0.01
SDC2-201ENST00000302190 PSMD1Q99460 953 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 INTS2Q9H0H0 1204 aaKnown RBP15.12■□□□□ 0.01
SDC2-201ENST00000302190 THAP2Q9H0W7 228 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 KLHL11Q9NVR0 708 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
SDC2-201ENST00000302190 ECE2O60344 883 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 ERFP50548 548 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 AADACL2Q6P093 401 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 NLRX1Q86UT6 975 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 KIFC3Q9BVG8 833 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 ANAPC7Q9UJX3 599 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 MRPL11Q9Y3B7 192 aaKnown RBP15.12■□□□□ 0.01
SDC2-201ENST00000302190 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
SDC2-201ENST00000302190 ZNF131P52739 623 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 PRM3Q9NNZ6 103 aa15.12■□□□□ 0.01
SDC2-201ENST00000302190 KLRG2A4D1S0 409 aaPredicted RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 DDTLA6NHG4 134 aaPredicted RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 IPO5O00410 1097 aaKnown RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 CD58P19256 250 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 SESN3P58005 492 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 ERVK-9P63128 1117 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 NEDD9Q14511 834 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 TTMPQ5BVD1 217 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 TMEM179Q6ZVK1 233 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 EEPD1Q7L9B9 569 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 HOMER3Q9NSC5 361 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 CCDC188H7C350 402 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 SOX5P35711 763 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 OSTNP61366 133 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 PASKQ96RG2 1323 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 IRS2Q9Y4H2 1338 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 TISP43B9A030 160 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 GOLGA8SH3BPF8 625 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 GOLGA8MH3BSY2 632 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 HIP1RO75146 1068 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 PPP1R18Q6NYC8 613 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 CCDC137Q6PK04 289 aaKnown RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 LRRC55Q6ZSA7 311 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 TRIM59Q8IWR1 403 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
SDC2-201ENST00000302190 HAS1Q92839 578 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 NT5C1BQ96P26 610 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 C1orf112Q9NSG2 853 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 ODF2LQ9ULJ1 636 aa15.11■□□□□ 0.01
SDC2-201ENST00000302190 TMEM150BA6NC51 233 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 FOXN3O00409 490 aaPredicted RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 MSH4O15457 936 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 ECEL1O95672 775 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 GAP43P17677 238 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 USP11P51784 963 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 SETDB1Q15047 1291 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 TMED2Q15363 201 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 SNCBQ16143 134 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 CC2D2BQ6DHV5 1058 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 FAM43BQ6ZT52 329 aaPredicted RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 IFT74Q96LB3 600 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 EPN3Q9H201 632 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 RIOX1Q9H6W3 641 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 HAUS2Q9NVX0 235 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 ATF2P15336 505 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 NSFP46459 744 aaKnown RBP15.1■□□□□ 0.01
SDC2-201ENST00000302190 FMO5P49326 533 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 LIG4P49917 911 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 PMS2P54278 862 aa15.1■□□□□ 0.01
SDC2-201ENST00000302190 MXRA7P84157 204 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms