RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 RHOT1Q8IXI2 618 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 CEP120Q8N960 986 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 N4BP2L2Q92802 583 aaPredicted RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 MS4A14Q96JA4 679 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 IPO11Q9UI26 975 aaKnown RBP20.65■□□□□ 0.9
TSR1-201ENST00000301364 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 DIP2BQ9P265 1576 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 SYNJ2BP-COX16A0A087WUM0 186 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 CLDN3O15551 220 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 PEX19P40855 299 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 KLHL38Q2WGJ6 581 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 CEP55Q53EZ4 464 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 HSP90AA5PQ58FG0 334 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 SESTD1Q86VW0 696 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 SNF8Q96H20 258 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 COX16Q9P0S2 106 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 TMEM270Q6UE05 265 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 RPAINQ86UA6 219 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 KCTD17Q8N5Z5 321 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 SNX25Q9H3E2 840 aa20.65■□□□□ 0.9
TSR1-201ENST00000301364 RTN2O75298 545 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 CCNA1P78396 465 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 HDLBPQ00341 1268 aaKnown RBP20.64■□□□□ 0.9
TSR1-201ENST00000301364 ST3GAL1Q11201 340 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 NCAPHQ15003 741 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 RAPH1Q70E73 1250 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 FAM213AQ9BRX8 229 aa20.64■□□□□ 0.9
TSR1-201ENST00000301364 RBM12Q9NTZ6 932 aaKnown RBP20.64■□□□□ 0.9
TSR1-201ENST00000301364 CFAP73A6NFT4 308 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 GSTA1P08263 222 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 GSTA2P09210 222 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 MMEL1Q495T6 779 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 FBXL13Q8NEE6 735 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 DCPSQ96C86 337 aaKnown RBP20.64■□□□□ 0.89
TSR1-201ENST00000301364 HEXIM2Q96MH2 286 aaKnown RBP20.64■□□□□ 0.89
TSR1-201ENST00000301364 DNAJC7Q99615 494 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 HERC5Q9UII4 1024 aaKnown RBP20.64■□□□□ 0.89
TSR1-201ENST00000301364 PPP1R9AQ9ULJ8 1098 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 PITPNM2Q9BZ72 1349 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 NFIXQ14938 502 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 KIAA1755Q5JYT7 1200 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 DNAAF3Q8N9W5 541 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 ZWILCHQ9H900 591 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 SCOCQ9UIL1 159 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 ANGPTL2Q9UKU9 493 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 TOB1P50616 345 aaPredicted RBP20.64■□□□□ 0.89
TSR1-201ENST00000301364 GALCP54803 685 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 WDR93Q6P2C0 686 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 HAUS6Q7Z4H7 955 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 SYT2Q8N9I0 419 aaPredicted RBP20.64■□□□□ 0.89
TSR1-201ENST00000301364 NLRP7Q8WX94 980 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 SPC25Q9HBM1 224 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 APEX2Q9UBZ4 518 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 PPLO60437 1756 aa20.64■□□□□ 0.89
TSR1-201ENST00000301364 PALM3A6NDB9 673 aaPredicted RBP20.63■□□□□ 0.89
TSR1-201ENST00000301364 SCARA5Q6ZMJ2 495 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 GRAMD1AQ96CP6 724 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 KLC2Q9H0B6 622 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 PFDN6O15212 129 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 SMIM24O75264 130 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
TSR1-201ENST00000301364 RC3H1Q5TC82 1133 aaKnown RBP20.63■□□□□ 0.89
TSR1-201ENST00000301364 FAM47EQ6ZV65 393 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 IP6K2Q9UHH9 426 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 PREX1Q8TCU6 1659 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 DEPDC5O75140 1603 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 TOM1L1O75674 476 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 FAM167AQ96KS9 214 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 FUT8Q9BYC5 575 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 KCND2Q9NZV8 630 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 TLK1Q9UKI8 766 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 SRGAP2CP0DJJ0 459 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 PDHBP11177 359 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 NMT1P30419 496 aaKnown RBP20.63■□□□□ 0.89
TSR1-201ENST00000301364 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 SEPT12Q8IYM1 358 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 PRPF38AQ8NAV1 312 aaKnown RBP20.63■□□□□ 0.89
TSR1-201ENST00000301364 TIPINQ9BVW5 301 aa20.63■□□□□ 0.89
TSR1-201ENST00000301364 MAP3K7O43318 606 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 AGTP01019 485 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 OSTNP61366 133 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 IFRD2Q12894 506 aaPredicted RBP20.62■□□□□ 0.89
TSR1-201ENST00000301364 NSUN6Q8TEA1 469 aaKnown RBP20.62■□□□□ 0.89
TSR1-201ENST00000301364 CCDC68Q9H2F9 335 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 SPATS2LQ9NUQ6 558 aaKnown RBP20.62■□□□□ 0.89
TSR1-201ENST00000301364 ECE2O60344 883 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 GRM1Q13255 1194 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 NTRK3Q16288 839 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 CIAPIN1Q6FI81 312 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 C7orf31Q8N865 590 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 EPS15L1Q9UBC2 864 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 COPEO14579 308 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 KPNA2P52292 529 aaKnown RBP20.62■□□□□ 0.89
TSR1-201ENST00000301364 ERVK-24P63145 666 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 FIGNQ5HY92 759 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 CFAP36Q96G28 342 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 REEP2Q9BRK0 252 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 NYAP2Q9P242 653 aa20.62■□□□□ 0.89
TSR1-201ENST00000301364 KIF20BQ96Q89 1820 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms