RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TMEM266Q2M3C6 531 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 ANKRD54Q6NXT1 300 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 SHC4Q6S5L8 630 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 PCYT2Q99447 389 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 JPH1Q9HDC5 661 aaPredicted RBP23.43■■□□□ 1.34
SMCO4-201ENST00000298966 DACT1Q9NYF0 836 aa23.43■■□□□ 1.34
SMCO4-201ENST00000298966 DDX25Q9UHL0 483 aaKnown RBP23.43■■□□□ 1.34
SMCO4-201ENST00000298966 SMIM35A0A1B0GVV1 85 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 PROB1E7EW31 1015 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 GALR2O43603 387 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-201ENST00000298966 TXLNAP40222 546 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 CALCRLQ16602 461 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 Q4G0T1 1027 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 TMEM184AQ6ZMB5 413 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 ELOA2Q8IYF1 753 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-201ENST00000298966 FMR1NBQ8N0W7 255 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-201ENST00000298966 COLGALT1Q8NBJ5 622 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 TRAPPC12Q8WVT3 735 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 S1PR5Q9H228 398 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 GOLPH3LQ9H4A5 285 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 JADE2Q9NQC1 790 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 C1orf112Q9NSG2 853 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 SLC9A2Q9UBY0 812 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 USP25Q9UHP3 1055 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 MYO10Q9HD67 2058 aa23.42■■□□□ 1.34
SMCO4-201ENST00000298966 DENND3A2RUS2 1198 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 FSCN2O14926 492 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 PDGFBP01127 241 aaPredicted RBP23.41■■□□□ 1.34
SMCO4-201ENST00000298966 PFKFB1P16118 471 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 SYKP43405 635 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 PLCB4Q15147 1175 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 ODR4Q5SWX8 454 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 SLFN12Q8IYM2 578 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 MTMR9Q96QG7 549 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 CSRNP2Q9H175 543 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 ERVK-5Q9HDB9 667 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 PUF60Q9UHX1 559 aaKnown RBP23.41■■□□□ 1.34
SMCO4-201ENST00000298966 GINS2Q9Y248 185 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 NR2E1Q9Y466 385 aa23.41■■□□□ 1.34
SMCO4-201ENST00000298966 VWA3AA6NCI4 1184 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 SLC26A4O43511 780 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 NR1I2O75469 434 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 RPS6KA5O75582 802 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 SP100P23497 879 aaPredicted RBP23.4■■□□□ 1.34
SMCO4-201ENST00000298966 FXR2P51116 673 aaKnown RBP eCLIP23.4■■□□□ 1.34
SMCO4-201ENST00000298966 SNW1Q13573 536 aaKnown RBP23.4■■□□□ 1.34
SMCO4-201ENST00000298966 TPRNQ4KMQ1 711 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 FAM102BQ5T8I3 360 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 PLPP4Q5VZY2 271 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 LRSAM1Q6UWE0 723 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 PLPPR4Q7Z2D5 763 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 CLIC6Q96NY7 704 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 ADAM2Q99965 735 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 APOL5Q9BWW9 433 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 RGS18Q9NS28 235 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 TYW1Q9NV66 732 aaKnown RBP23.4■■□□□ 1.34
SMCO4-201ENST00000298966 LZTS1Q9Y250 596 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 STK24Q9Y6E0 443 aa23.4■■□□□ 1.34
SMCO4-201ENST00000298966 A0A1B0GVL5 298 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 MGEA5O60502 916 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 TDP2O95551 362 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 HOXB8P17481 243 aaPredicted RBP23.39■■□□□ 1.33
SMCO4-201ENST00000298966 LAG3P18627 525 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 STAT5BP51692 787 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 NDUFA8P51970 172 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 SETQ01105 290 aaPredicted RBP23.39■■□□□ 1.33
SMCO4-201ENST00000298966 KCNC3Q14003 757 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 PDIA5Q14554 519 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 KANK3Q6NY19 840 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 SYCE2Q6PIF2 218 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 MTHFD1LQ6UB35 978 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 SLC24A5Q71RS6 500 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 NIPA1Q7RTP0 329 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 UBALD2Q8IYN6 164 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 KREMEN2Q8NCW0 462 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 FAM20AQ96MK3 541 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 SDF4Q9BRK5 362 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 TMEM60Q9H2L4 133 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 ENTPD7Q9NQZ7 604 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 HOOK1Q9UJC3 728 aaKnown RBP23.39■■□□□ 1.33
SMCO4-201ENST00000298966 KCNH3Q9ULD8 1083 aa23.39■■□□□ 1.33
SMCO4-201ENST00000298966 SYCE3A1L190 88 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 EDIL3O43854 480 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 ZNF202O95125 648 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 ZNF76P36508 570 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 MTMR3Q13615 1198 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 LLGL2Q6P1M3 1020 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 RBM43Q6ZSC3 357 aaKnown RBP23.38■■□□□ 1.33
SMCO4-201ENST00000298966 ASCL5Q7RTU5 278 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 TCF25Q9BQ70 676 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 CCSER1Q9C0I3 900 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 TNMDQ9H2S6 317 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 ATP6V0A4Q9HBG4 840 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 NGRNQ9NPE2 291 aaKnown RBP23.38■■□□□ 1.33
SMCO4-201ENST00000298966 HCSTQ9UBK5 93 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 SORCS3Q9UPU3 1222 aa23.38■■□□□ 1.33
SMCO4-201ENST00000298966 NOC2LQ9Y3T9 749 aaKnown RBP23.38■■□□□ 1.33
SMCO4-201ENST00000298966 EVPLQ92817 2033 aa23.37■■□□□ 1.33
SMCO4-201ENST00000298966 GOLGA6L3A6NEY3 463 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms