RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CTAGE1Q96RT6 745 aa27.05■■□□□ 1.92
GTF2A1-201ENST00000298173 TMEM134Q9H6X4 195 aa27.05■■□□□ 1.92
GTF2A1-201ENST00000298173 AGPAT3Q9NRZ7 376 aa27.05■■□□□ 1.92
GTF2A1-201ENST00000298173 CGNQ9P2M7 1197 aaKnown RBP27.05■■□□□ 1.92
GTF2A1-201ENST00000298173 A0A1B0GTH6 734 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 NR3C1P04150 777 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 NR2F2P24468 414 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 POU5F1BQ06416 359 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 NR1I3Q14994 352 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 CDCA2Q69YH5 1023 aaPredicted RBP27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 CXCL17Q6UXB2 119 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 HS2ST1Q7LGA3 356 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 SYCP3Q8IZU3 236 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 DEPTORQ8TB45 409 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 CNOT6LQ96LI5 555 aaKnown RBP27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 INTS13Q9NVM9 706 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 EXOC7Q9UPT5 735 aa27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 TRIP12Q14669 1992 aaPredicted RBP27.04■■□□□ 1.92
GTF2A1-201ENST00000298173 LRRIQ4A6NIV6 560 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 CETN3O15182 167 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 CLIC2O15247 247 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 RPL13P26373 211 aaKnown RBP27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 CDC25BP30305 580 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 MARSP56192 900 aaKnown RBP27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 MYBPC2Q14324 1141 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 KCNA10Q16322 511 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 RHPN2Q8IUC4 686 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 SLC9A9Q8IVB4 645 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 C12orf56Q8IXR9 622 aa27.03■■□□□ 1.92
GTF2A1-201ENST00000298173 GJB1P08034 283 aa27.02■■□□□ 1.92
GTF2A1-201ENST00000298173 TMOD1P28289 359 aa27.02■■□□□ 1.92
GTF2A1-201ENST00000298173 NFRKBQ6P4R8 1299 aa27.02■■□□□ 1.92
GTF2A1-201ENST00000298173 KIAA0319LQ8IZA0 1049 aa27.02■■□□□ 1.92
GTF2A1-201ENST00000298173 MAGEC2Q9UBF1 373 aaPredicted RBP27.02■■□□□ 1.92
GTF2A1-201ENST00000298173 CBFA2T2O43439 604 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 GNA14O95837 355 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 ASGR1P07306 291 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 COPB1P53618 953 aaKnown RBP27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 PCSK9Q8NBP7 692 aaKnown RBP27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 RNF149Q8NC42 400 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 ANKRD20A12PQ8NF67 263 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 PPP1R13LQ8WUF5 828 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 RTN4Q9NQC3 1192 aaKnown RBP27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 HDAC6Q9UBN7 1215 aa27.01■■□□□ 1.92
GTF2A1-201ENST00000298173 K7ERI5 159 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 SRGAP2CP0DJJ0 459 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 CHMP4BP1P59074 171 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 SH3TC2Q8TF17 1288 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 NFKBIZQ9BYH8 718 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 CCDC113Q9H0I3 377 aa27.01■■□□□ 1.91
GTF2A1-201ENST00000298173 SMIM35A0A1B0GVV1 85 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 TISP43B9A030 160 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 EFNA5P52803 228 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 TFDP1Q14186 410 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 SLC39A4Q6P5W5 647 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 TUBGCP2Q9BSJ2 902 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 FRMPD3Q5JV73 1810 aa27■■□□□ 1.91
GTF2A1-201ENST00000298173 ANKRD63C9JTQ0 380 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 PIGRP01833 764 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 ADSSP30520 456 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 PTENP60484 403 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 NBPF20Q3BBV1 942 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 RNF180Q86T96 592 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 IFNLR1Q8IU57 520 aaPredicted RBP26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 CREBRFQ8IUR6 639 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 C7orf31Q8N865 590 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 IFT122Q9HBG6 1241 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 TAB2Q9NYJ8 693 aa26.99■■□□□ 1.91
GTF2A1-201ENST00000298173 AKAP3O75969 853 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 C2orf40Q9H1Z8 148 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 VPS16Q9H269 839 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 PHLPP2Q6ZVD8 1323 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 C17orf102A2RUQ5 167 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 SLC16A3O15427 465 aaKnown RBP26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 TEX33O43247 280 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 TREHO43280 583 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 GNAT1P11488 350 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 CASP4P49662 377 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 MIIPQ5JXC2 388 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 BORCS6Q96GS4 357 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 MKNK1Q9BUB5 465 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 AKT3Q9Y243 479 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 STYXL1Q9Y6J8 313 aa26.98■■□□□ 1.91
GTF2A1-201ENST00000298173 EDN1P05305 212 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 ZNF200P98182 395 aaPredicted RBP26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 STRN3Q13033 797 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 FILIP1LQ4L180 1135 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 FRMD5Q7Z6J6 570 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 SESTD1Q86VW0 696 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 NLRP4Q96MN2 994 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 MAP7D2Q96T17 732 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 CBWD1Q9BRT8 395 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 TSEN34Q9BSV6 310 aaKnown RBP26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.97■■□□□ 1.915e-7■■■■■ 39.7
GTF2A1-201ENST00000298173 FZD8Q9H461 694 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 GTF2IRD1Q9UHL9 959 aa26.97■■□□□ 1.91
GTF2A1-201ENST00000298173 GRIN2DO15399 1336 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 N4BP3O15049 544 aa26.96■■□□□ 1.91
GTF2A1-201ENST00000298173 VTNP04004 478 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms