RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 VIMP08670 466 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 FAM86B2P0C5J1 330 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 HSPA6P17066 643 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 CHRNA3P32297 505 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 Q4G0T1 1027 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 TNFAIP8L3Q5GJ75 292 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 TTC27Q6P3X3 843 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 BTNL9Q6UXG8 535 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 ZDHHC14Q8IZN3 488 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 KRT35Q92764 455 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 KCNG1Q9UIX4 513 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 STK24Q9Y6E0 443 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 LTBP4Q8N2S1 1624 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 AFF2P51816 1311 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 MPHOSPH10O00566 681 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 TNFAIP3P21580 790 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 FGFR4P22455 802 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 NMT1P30419 496 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 SLCO1A2P46721 670 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 IFNAR2P48551 515 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 MARCKSL1P49006 195 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 HADHBP55084 474 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 AP3B2Q13367 1082 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 COG2Q14746 738 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 CRYMQ14894 314 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 NFIL3Q16649 462 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 ACCSLQ4AC99 568 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 FAM133BQ5BKY9 247 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 TBC1D22AQ8WUA7 517 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 TCP11Q8WWU5 503 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 TBC1D31Q96DN5 1066 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 INTS2Q9H0H0 1204 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 ABCF3Q9NUQ8 709 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 SEPT11Q9NVA2 429 aaKnown RBP11□□□□□ -0.65
CCDC36-201ENST00000296449 PCYOX1Q9UHG3 505 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 GGA1Q9UJY5 639 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 AGAP1Q9UPQ3 857 aa11□□□□□ -0.65
CCDC36-201ENST00000296449 SYNGAP1Q96PV0 1343 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 EIF3DO15371 548 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 RIPK2O43353 540 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 EYA4O95677 639 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 CLTAP09496 248 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 CNGA2Q16280 664 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 RINT1Q6NUQ1 792 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 TBC1D1Q86TI0 1168 aaPredicted RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 CCHCR1Q8TD31 782 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 MKNK1Q9BUB5 465 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 STMN4Q9H169 189 aaPredicted RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 RGL1Q9NZL6 768 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 APEX2Q9UBZ4 518 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 MTRF1LQ9UGC7 380 aaKnown RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 PARP2Q9UGN5 583 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 VAV3Q9UKW4 847 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 RABGAP1Q9Y3P9 1069 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 UBAP1LF5GYI3 381 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 PODXLO00592 558 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 MSH4O15457 936 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 TRIM49P0CI25 452 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 TRIM49CP0CI26 452 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 SLURP2P0DP57 97 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 GAP43P17677 238 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 CTNNA2P26232 953 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 AUHQ13825 339 aaKnown RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 CTTNQ14247 550 aaKnown RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 KIF22Q14807 665 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 ARHGAP44Q17R89 818 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 BARGINQ6ZT62 677 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 PNMA8AQ86V59 439 aaPredicted RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 RHOT2Q8IXI1 618 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 FAM20AQ96MK3 541 aa10.99□□□□□ -0.65
CCDC36-201ENST00000296449 EIF2AK1Q9BQI3 630 aaKnown RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 NSRP1Q9H0G5 558 aaKnown RBP10.99□□□□□ -0.65
CCDC36-201ENST00000296449 MIF4GDA9UHW6 222 aaKnown RBP10.98□□□□□ -0.65
CCDC36-201ENST00000296449 EML1O00423 815 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 RASGRF2O14827 1237 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 SNX3O60493 162 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 ALAS1P13196 640 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 SLC15A2Q16348 729 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 CCDC38Q502W7 563 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 C11orf63Q6NUN7 778 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 CCDC137Q6PK04 289 aaKnown RBP10.98□□□□□ -0.65
CCDC36-201ENST00000296449 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 HOOK2Q96ED9 719 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 STAMBPL1Q96FJ0 436 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 ZSWIM1Q9BR11 485 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 POLR3CQ9BUI4 534 aaPredicted RBP10.98□□□□□ -0.65
CCDC36-201ENST00000296449 EBF2Q9HAK2 575 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 DBR1Q9UK59 544 aaKnown RBP10.98□□□□□ -0.65
CCDC36-201ENST00000296449 A0A1B0GUA9 196 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 ANKRD63C9JTQ0 380 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 FOXN3O00409 490 aaPredicted RBP10.98□□□□□ -0.65
CCDC36-201ENST00000296449 RAD21O60216 631 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 LRRN2O75325 713 aa10.98□□□□□ -0.65
CCDC36-201ENST00000296449 FAM13AO94988 1023 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms