RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 PRR16Q569H4 304 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 DDX53Q86TM3 631 aaKnown RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 PPFIBP1Q86W92 1011 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 TMEM105Q8N8V8 129 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 BICD2Q8TD16 824 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 NLRP7Q8WX94 980 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 ACSF2Q96CM8 615 aaPredicted RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 GCOM2Q9BZD3 368 aaPredicted RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 INO80BQ9C086 356 aaPredicted RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 DISC1Q9NRI5 854 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 FAM217BQ9NTX9 383 aaPredicted RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 PRR23AA6NEV1 266 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 GOLGA6L3A6NEY3 463 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 STX6O43752 255 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 ZC3H11AO75152 810 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFC4-201ENST00000296273 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
RFC4-201ENST00000296273 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFC4-201ENST00000296273 JAK3P52333 1124 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 PRKCEQ02156 737 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 RARS2Q5T160 578 aaKnown RBP11.86□□□□□ -0.51
RFC4-201ENST00000296273 RIT2Q99578 217 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 AGXT2Q9BYV1 514 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 CYP26B1Q9NR63 512 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 CDH22Q9UJ99 828 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 ZDHHC9Q9Y397 364 aa11.86□□□□□ -0.51
RFC4-201ENST00000296273 MYH9P35579 1960 aaKnown RBP11.86□□□□□ -0.51
RFC4-201ENST00000296273 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 ZNF862O60290 1169 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 GAS7O60861 476 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 ASGR2P07307 311 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 ADD1P35611 737 aaKnown RBP11.85□□□□□ -0.51
RFC4-201ENST00000296273 PHKA2P46019 1235 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 DNM2P50570 870 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 RAB27AP51159 221 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 USP11P51784 963 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 FGD1P98174 961 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 MCTP1Q6DN14 999 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 GLB1LQ6UWU2 654 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 OTOP3Q7RTS5 596 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 ASCL5Q7RTU5 278 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 CABP7Q86V35 215 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 ZNF410Q86VK4 478 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 RDM1Q8NG50 284 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
RFC4-201ENST00000296273 SYAP1Q96A49 352 aaPredicted RBP11.85□□□□□ -0.51
RFC4-201ENST00000296273 LENG9Q96B70 501 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 IGSF21Q96ID5 467 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 TCEANC2Q96MN5 208 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 SFXN1Q9H9B4 322 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 LIMD1Q9UGP4 676 aa11.85□□□□□ -0.51
RFC4-201ENST00000296273 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 ZNF623O75123 536 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 FGFR4P22455 802 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 EVCP57679 992 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 AKAP17AQ02040 695 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 TARBP2Q15633 366 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 ME3Q16798 604 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 ERMP1Q7Z2K6 904 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 GPR149Q86SP6 731 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 SLC22A17Q8WUG5 538 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 ZNF274Q96GC6 653 aaPredicted RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 ZNF668Q96K58 619 aaPredicted RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 RTP3Q9BQQ7 232 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 TEKT3Q9BXF9 490 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 NIFKQ9BYG3 293 aaKnown RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 TBC1D13Q9NVG8 400 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 NAP1L2Q9ULW6 460 aaPredicted RBP11.84□□□□□ -0.51
RFC4-201ENST00000296273 ZDBF2Q9HCK1 2354 aa11.84□□□□□ -0.51
RFC4-201ENST00000296273 IGKV6-21A0A0C4DH24 114 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 MSH4O15457 936 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 GALTP07902 379 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 WEE2P0C1S8 567 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 EPCAMP16422 314 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 AOC1P19801 751 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 SYT1P21579 422 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 TDGQ13569 410 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 TOB2Q14106 344 aaPredicted RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 XKR3Q5GH77 459 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 NOMO2Q5JPE7 1267 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 LRCH2Q5VUJ6 765 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 C15orf39Q6ZRI6 1047 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 TMEM173Q86WV6 379 aaPredicted RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 C12orf76Q8N812 135 aaPredicted RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 SLC5A5Q92911 643 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 PGBD4Q96DM1 585 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 JPH2Q9BR39 696 aaPredicted RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 RNF26Q9BY78 433 aaPredicted RBP11.83□□□□□ -0.52
RFC4-201ENST00000296273 SMOC2Q9H3U7 446 aa11.83□□□□□ -0.52
RFC4-201ENST00000296273 NRDE2Q9H7Z3 1164 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms