RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 PCDHGC5Q9Y5F6 944 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 COL4A3BPQ9Y5P4 624 aa10.91□□□□□ -0.66
CCDC58-201ENST00000291458 H3BNC9 293 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 H3BQV1 296 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 HRO43593 1189 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 LINC00271P0C7V0 271 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 SFPQP23246 707 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 BMPR1AP36894 532 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 PBX3P40426 434 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 MRPS5P82675 430 aaKnown RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 DSC3Q14574 896 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 OTUD6AQ7L8S5 288 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 C4orf19Q8IY42 314 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 ABI1Q8IZP0 508 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 TTC13Q8NBP0 860 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 RNF149Q8NC42 400 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 HELQQ8TDG4 1101 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 ADAMTS19Q8TE59 1207 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 PSPC1Q8WXF1 523 aaKnown RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 LPPQ93052 612 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 MRPL38Q96DV4 380 aaKnown RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 ASB2Q96Q27 587 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 JPH2Q9BR39 696 aaPredicted RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 FOXP1Q9H334 677 aaPredicted RBP10.9□□□□□ -0.66
CCDC58-201ENST00000291458 IGFLR1Q9H665 355 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 INPP5FQ9Y2H2 1132 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 RWDD3Q9Y3V2 267 aa10.9□□□□□ -0.66
CCDC58-201ENST00000291458 IGKV6-21A0A0C4DH24 114 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 MED24O75448 989 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 SLITRK3O94933 977 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 ITGB1P05556 798 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 KCNA5P22460 613 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 CA8P35219 290 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.67
CCDC58-201ENST00000291458 RFC5P40937 340 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 LAMTOR4Q0VGL1 99 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 CLUL1Q15846 466 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 ECHDC2Q86YB7 292 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 THNSL1Q8IYQ7 743 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 ASAP3Q8TDY4 903 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 HLA-CQ95604 372 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 DHX33Q9H6R0 707 aaKnown RBP10.89□□□□□ -0.67
CCDC58-201ENST00000291458 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 XPNPEP1Q9NQW7 623 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 RNF19AQ9NV58 838 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 TMEM161AQ9NX61 479 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 SMC3Q9UQE7 1217 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 KIF3AQ9Y496 699 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 PCDHB6Q9Y5E3 794 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 EYSQ5T1H1 3165 aa10.89□□□□□ -0.67
CCDC58-201ENST00000291458 MEIS3P2A8K0S8 358 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 H3BQ06 376 aaPredicted RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 LIG1P18858 919 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CCT6AP40227 531 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 PADI6Q6TGC4 694 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 FERMT3Q86UX7 667 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 ZNF410Q86VK4 478 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 COLGALT1Q8NBJ5 622 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 ERMNQ8TAM6 284 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 ATXN2LQ8WWM7 1075 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CLP1Q92989 425 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CPB2Q96IY4 423 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 GBP3Q9H0R5 595 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 UBE2ZQ9H832 354 aaPredicted RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 MINDY3Q9H8M7 445 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 BRWD1Q9NSI6 2320 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 TYW1Q9NV66 732 aaKnown RBP10.88□□□□□ -0.67
CCDC58-201ENST00000291458 CLDND1Q9NY35 253 aa10.88□□□□□ -0.67
CCDC58-201ENST00000291458 VPS37CA5D8V6 355 aaPredicted RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 LRRIQ4A6NIV6 560 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 INO80B-WBP1J3KQ70 363 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 ERLIN2O94905 339 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 ATF7P17544 494 aaPredicted RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 DNAJB1P25685 340 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 IRS1P35568 1242 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 PHKA2P46019 1235 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 RARRES1P49788 294 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 TOB1P50616 345 aaPredicted RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 ADGRD2Q7Z7M1 963 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 RBM23Q86U06 439 aaKnown RBP10.87□□□□□ -0.67
CCDC58-201ENST00000291458 LRRC43Q8N309 656 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 SNX29Q8TEQ0 813 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
CCDC58-201ENST00000291458 TCP11Q8WWU5 503 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms