RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 RSPH3Q86UC2 560 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 KIF2BQ8N4N8 673 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 VPS11Q9H270 941 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 PRELPP51888 382 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 ARFIP2P53365 341 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 DDX42Q86XP3 938 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 WDR17Q8IZU2 1322 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 CHRNA3P32297 505 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 SLC27A3Q5K4L6 730 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 FAM118BQ9BPY3 351 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 GOLPH3Q9H4A6 298 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 GOLGA8QA0A0J9YX86 632 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 GOLGA8OA6NCC3 632 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 GOLGA8NF8WBI6 632 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 HSPA9P38646 679 aaKnown RBP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 PLCB4Q15147 1175 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 EFHD1Q9BUP0 239 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 RAD51CO43502 376 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 C16orf87Q6PH81 154 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 ZNF668Q96K58 619 aaPredicted RBP16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 HAUS8Q9BT25 410 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 RFX7Q2KHR2 1363 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 DIAPH2O60879 1101 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 PSAPP07602 524 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 KRT10P13645 584 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 SEC16BQ96JE7 1060 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 OCRLQ01968 901 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 GRAMD4Q6IC98 578 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 HACE1Q8IYU2 909 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 FGFR1OP2Q9NVK5 253 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 MINPP1Q9UNW1 487 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 RAD17O75943 681 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 GH2P01242 217 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 SOX5P35711 763 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 TNFAIP1Q13829 316 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 THNSL1Q8IYQ7 743 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 SH3GL3Q99963 347 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 CARSP49589 748 aaKnown RBP16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 SPATA21Q7Z572 469 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 CELF4Q9BZC1 486 aaKnown RBP16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 DRC3Q9H069 523 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 ORC6Q9Y5N6 252 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
SHROOM4-201ENST00000289292 NVLO15381 856 aaKnown RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 ATP5HO75947 161 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 LONP2Q86WA8 852 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 COPB2P35606 906 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 PDXDC2PQ6P474 469 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 REXO1L1PQ8IX06 675 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 SLC26A7Q8TE54 656 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 FAM81BQ96LP2 452 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 IPO5O00410 1097 aaKnown RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 KRT37O76014 449 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 SRGNP10124 158 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 ELF1P32519 619 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 ALDH18A1P54886 795 aaKnown RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 KLC2Q9H0B6 622 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 STOML1Q9UBI4 398 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 LSP1P33241 339 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 YWHAHQ04917 246 aaPredicted RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 LRRC36Q1X8D7 754 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 LMBRD2Q68DH5 695 aaPredicted RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 C1orf228Q6PIY5 440 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 SLC30A5Q8TAD4 765 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 SLITRK6Q9H5Y7 841 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 GTSE1Q9NYZ3 720 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 WDR75Q8IWA0 830 aaKnown RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 CDC26Q8NHZ8 85 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 ATXN7L3BQ96GX2 97 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 RPF1Q9H9Y2 349 aaKnown RBP16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 ZNF711Q9Y462 761 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 NEO1Q92859 1461 aa16.34■□□□□ 0.21
SHROOM4-201ENST00000289292 K7ERI5 159 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 PIK3R2O00459 728 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 ENO1P06733 434 aaKnown RBP16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 NBPF10Q6P3W6 841 aaKnown RBP16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 XXYLT1Q8NBI6 393 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 NPHS2Q9NP85 383 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 UBE2Q2LH0YL09 131 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 ATICP31939 592 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 ANTXR2P58335 489 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms