RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 KCNA10Q16322 511 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 HERC4Q5GLZ8 1057 aaPredicted RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 DHX40Q8IX18 779 aaKnown RBP9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 C12orf56Q8IXR9 622 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 C7orf31Q8N865 590 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 ARHGAP28Q9P2N2 729 aa9.26□□□□□ -0.93
PTPDC1-201ENST00000288976 ATXN8OSP0DMR3 200 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 CCNE1P24864 410 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MARK3P27448 753 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MCCD1P59942 119 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 BEX3Q00994 111 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 EDRF1Q3B7T1 1238 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ODR4Q5SWX8 454 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 C1orf53Q5VUE5 145 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 TAF2Q6P1X5 1199 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 FAM178BQ8IXR5 827 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 PSPC1Q8WXF1 523 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 RUFY1Q96T51 708 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 TSG101Q99816 390 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MRPL44Q9H9J2 332 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 PDXKO00764 312 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ACLYP53396 1101 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MYL5Q02045 173 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 GSE1Q14687 1217 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 FAM187BQ17R55 369 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ISM2Q6H9L7 571 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MAP4K3Q8IVH8 894 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MNS1Q8NEH6 495 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 LMBR1Q8WVP7 490 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 P2RX5Q93086 422 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 CCDC113Q9H0I3 377 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 UNC93B1Q9H1C4 597 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 DNAJC25Q9H1X3 360 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 TRAF3IP3Q9Y228 551 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ZMYM2Q9UBW7 1377 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 RSPH10B2B2RC85 870 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 KIAA0391O15091 583 aaKnown RBP9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 CALUO43852 315 aaPredicted RBP9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 PHACTR2O75167 634 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 ASGR1P07306 291 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 RSPH10BP0C881 870 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 GLRA2P23416 452 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 PRCPP42785 496 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 LBX1P52954 281 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 RBL2Q08999 1139 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 STK4Q13043 487 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 IQCB1Q15051 598 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 CENPPQ6IPU0 288 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 MAP7D2Q96T17 732 aa9.25□□□□□ -0.93
PTPDC1-201ENST00000288976 TMEM150BA6NC51 233 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 FGFR1OPO95684 399 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 NPTX2P47972 431 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 MKRN4PQ13434 485 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 ZCWPW2Q504Y3 356 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 TMEM161BQ8NDZ6 487 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SCFD1Q8WVM8 642 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 NELFBQ8WX92 580 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 KCTD10Q9H3F6 313 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 THAP9Q9H5L6 903 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 KMT5AQ9NQR1 393 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 TYW1Q9NV66 732 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 K7ENM7 598 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 BIN1O00499 593 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 MAPK13O15264 365 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 PTGS1P23219 599 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 ZNF165P49910 485 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 EFCAB12Q6NXP0 572 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 ASAP3Q8TDY4 903 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SH3TC2Q8TF17 1288 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SUCLA2Q9P2R7 463 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 GDAQ9Y2T3 454 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 MROH7Q68CQ1 1323 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 RALGAPA2Q2PPJ7 1873 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 A0A1W2PQ45 241 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 A0A1W2PQY0 241 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SLC16A3O15427 465 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CAPN15O75808 1086 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 PGK1P00558 417 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 KCNA4P22459 653 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 PTK7Q13308 1070 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SKIV2LQ15477 1246 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 KNOP1Q1ED39 458 aaKnown RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SPATA1Q5VX52 437 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SRGAP1Q7Z6B7 1085 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 PPFIBP1Q86W92 1011 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 FAM114A1Q8IWE2 563 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CEP63Q96MT8 703 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CTNND2Q9UQB3 1225 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 GNA14O95837 355 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SLC9A9Q8IVB4 645 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 ZBTB8OSQ8IWT0 167 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 CTNNBL1Q8WYA6 563 aaPredicted RBP9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 BSNDQ8WZ55 320 aa9.24□□□□□ -0.93
PTPDC1-201ENST00000288976 SLC39A2Q9NP94 309 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms