RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 CLLU1OSQ5K130 101 aa22.72■■□□□ 1.23
RAB28-201ENST00000288723 ARL6IP4Q66PJ3 421 aaKnown RBP22.72■■□□□ 1.23
RAB28-201ENST00000288723 LPPQ93052 612 aa22.72■■□□□ 1.23
RAB28-201ENST00000288723 ALG13Q9NP73 1137 aaKnown RBP22.72■■□□□ 1.23
RAB28-201ENST00000288723 FNDC1Q4ZHG4 1894 aaPredicted RBP22.71■■□□□ 1.23
RAB28-201ENST00000288723 RB1P06400 928 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 MBTD1Q05BQ5 628 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 LRRC55Q6ZSA7 311 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 HELQQ8TDG4 1101 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 BSNDQ8WZ55 320 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 MRPL38Q96DV4 380 aaKnown RBP22.71■■□□□ 1.23
RAB28-201ENST00000288723 C11orf84Q9BUA3 381 aaPredicted RBP22.71■■□□□ 1.23
RAB28-201ENST00000288723 TMEM117Q9H0C3 514 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 FAM105AQ9NUU6 356 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 DNM3Q9UQ16 869 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 CLIC4Q9Y696 253 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 LRRIQ4A6NIV6 560 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 MEIS3P2A8K0S8 358 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 ERLIN2O94905 339 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 EOMESO95936 686 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 GRIN1Q05586 938 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 ABI1Q8IZP0 508 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 CPB2Q96IY4 423 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 PNMA5Q96PV4 448 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 TRAIPQ9BWF2 469 aa22.71■■□□□ 1.23
RAB28-201ENST00000288723 SPTBN5Q9NRC6 3674 aaKnown RBP22.7■■□□□ 1.23
RAB28-201ENST00000288723 RALGAPA2Q2PPJ7 1873 aa22.7■■□□□ 1.23
RAB28-201ENST00000288723 STX6O43752 255 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 TSPAN1O60635 241 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 POU5F1BQ06416 359 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 IFNLR1Q8IU57 520 aaPredicted RBP22.7■■□□□ 1.22
RAB28-201ENST00000288723 KLHL23Q8NBE8 558 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 SPRYD3Q8NCJ5 442 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 CWH43Q9H720 699 aa22.7■■□□□ 1.22
RAB28-201ENST00000288723 HOXA2O43364 376 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 EYA4O95677 639 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 CEBPZQ03701 1054 aaKnown RBP22.69■■□□□ 1.22
RAB28-201ENST00000288723 PTPROQ16827 1216 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 UBXN11Q5T124 520 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 PLVAPQ9BX97 442 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 PLAGL2Q9UPG8 496 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 PCDHB2Q9Y5E7 798 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 KIAA1671Q9BY89 1806 aa22.69■■□□□ 1.22
RAB28-201ENST00000288723 B4GALT5O43286 388 aa22.68■■□□□ 1.22
RAB28-201ENST00000288723 ITGB1P05556 798 aa22.68■■□□□ 1.22
RAB28-201ENST00000288723 AMHR2Q16671 573 aa22.68■■□□□ 1.22
RAB28-201ENST00000288723 HSP90AA1P07900 732 aaKnown RBP22.68■■□□□ 1.22
RAB28-201ENST00000288723 NFKBIZQ9BYH8 718 aa22.68■■□□□ 1.22
RAB28-201ENST00000288723 ZNF623O75123 536 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 BMP15O95972 392 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 SKIP12755 728 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 DNAJB1P25685 340 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 PBX3P40426 434 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 CABP7Q86V35 215 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 CDR2LQ86X02 465 aaPredicted RBP22.67■■□□□ 1.22
RAB28-201ENST00000288723 P2RX5Q93086 422 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 RUSC1Q9BVN2 902 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 EIF2AQ9BY44 585 aaKnown RBP22.67■■□□□ 1.22
RAB28-201ENST00000288723 THEGQ9P2T0 379 aa22.67■■□□□ 1.22
RAB28-201ENST00000288723 SSBP05455 408 aaKnown RBP eCLIP22.66■■□□□ 1.22
RAB28-201ENST00000288723 ARF4P18085 180 aaPredicted RBP22.66■■□□□ 1.22
RAB28-201ENST00000288723 MARCKSP29966 332 aaPredicted RBP22.66■■□□□ 1.22
RAB28-201ENST00000288723 RAB27AP51159 221 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 TFF2Q03403 129 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 PTPAQ15257 358 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 HYIQ5T013 277 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 FOXD4L5Q5VV16 416 aaPredicted RBP22.66■■□□□ 1.22
RAB28-201ENST00000288723 COLGALT1Q8NBJ5 622 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 SPPL3Q8TCT6 385 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 FOXD4L4Q8WXT5 416 aaPredicted RBP22.66■■□□□ 1.22
RAB28-201ENST00000288723 CDK5RAP3Q96JB5 506 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 KIFC3Q9BVG8 833 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 INPP5FQ9Y2H2 1132 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 USP20Q9Y2K6 914 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 PCDHB12Q9Y5F1 795 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 LIG1P18858 919 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 NCBP1Q09161 790 aaKnown RBP22.66■■□□□ 1.22
RAB28-201ENST00000288723 CAMK1Q14012 370 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 RINT1Q6NUQ1 792 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 NOTUMQ6P988 496 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 LRRC43Q8N309 656 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 AAASQ9NRG9 546 aa22.66■■□□□ 1.22
RAB28-201ENST00000288723 MYO7AQ13402 2215 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 TTLL13PA6NNM8 815 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 UBA7P41226 1012 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 RAD51AP2Q09MP3 1159 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 PCBP1Q15365 356 aaKnown RBP eCLIP22.65■■□□□ 1.22
RAB28-201ENST00000288723 NAALADL2Q58DX5 795 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 TCEAL5Q5H9L2 206 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 SPECC1Q5M775 1068 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 CDCA2Q69YH5 1023 aaPredicted RBP22.65■■□□□ 1.22
RAB28-201ENST00000288723 AGMOQ6ZNB7 445 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 ZBTB8OSQ8IWT0 167 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 AK8Q96MA6 479 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 HES2Q9Y543 173 aa22.65■■□□□ 1.22
RAB28-201ENST00000288723 HIP1RO75146 1068 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 OFD1O75665 1012 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 AXLP30530 894 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 NAMPTP43490 491 aa22.64■■□□□ 1.22
RAB28-201ENST00000288723 AFF1P51825 1210 aaKnown RBP22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms