RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 SYT2Q8N9I0 419 aaPredicted RBP7.22□□□□□ -1.25
CD44-204ENST00000279452 ARNTL2Q8WYA1 636 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 BSNDQ8WZ55 320 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 TOP1MTQ969P6 601 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 DHX58Q96C10 678 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 CPB2Q96IY4 423 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 RAD9AQ99638 391 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 REEP2Q9BRK0 252 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 APOL6Q9BWW8 343 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 CCSER1Q9C0I3 900 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 C2orf40Q9H1Z8 148 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 TSPYL2Q9H2G4 693 aaPredicted RBP7.22□□□□□ -1.25
CD44-204ENST00000279452 ZNF576Q9H609 170 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 MINDY3Q9H8M7 445 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 IFT122Q9HBG6 1241 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 GDPD2Q9HCC8 539 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 KMT5AQ9NQR1 393 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 RGS18Q9NS28 235 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 AGPAT5Q9NUQ2 364 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 STK17AQ9UEE5 414 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 INPP5FQ9Y2H2 1132 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 ZDHHC9Q9Y397 364 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 INSL6Q9Y581 213 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 ADGRA3Q8IWK6 1321 aa7.22□□□□□ -1.25
CD44-204ENST00000279452 PDE4DIPQ5VU43 2346 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 MYH9P35579 1960 aaKnown RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 TBKBP1A7MCY6 615 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 K7ENM7 598 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 TULP1O00294 542 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 SLC16A4O15374 487 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 B4GALT5O43286 388 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 TSPAN1O60635 241 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 PRKCBP05771 671 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 FGFR1P11362 822 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 IDEP14735 1019 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 IGFBP4P22692 258 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 GUCY2CP25092 1073 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 MATR3P43243 847 aaKnown RBP eCLIP7.21□□□□□ -1.26
CD44-204ENST00000279452 NPTX2P47972 431 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 GATMP50440 423 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 RAB27AP51159 221 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 SMTNP53814 917 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 SLC12A3P55017 1021 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 PTENP60484 403 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 STRN3Q13033 797 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 PRPF4BQ13523 1007 aaKnown RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 MAPK6Q16659 721 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 NOTUMQ6P988 496 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 SHC4Q6S5L8 630 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 C1orf186Q6ZWK4 172 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 SV2BQ7L1I2 683 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 RTN4RL1Q86UN2 441 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 CDR2LQ86X02 465 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 MICALL1Q8N3F8 863 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 KCTD17Q8N5Z5 321 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 MYCT1Q8N699 235 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 LEO1Q8WVC0 666 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 BICD1Q96G01 975 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 GAS2L1Q99501 681 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 TIPINQ9BVW5 301 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 SCAND2PQ9GZW5 306 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 PRDM12Q9H4Q4 367 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 CHST12Q9NRB3 414 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 BLOC1S4Q9NUP1 217 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 FAM105AQ9NUU6 356 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 PRMT7Q9NVM4 692 aaPredicted RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 TMEM161AQ9NX61 479 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 KCND2Q9NZV8 630 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 LARSQ9P2J5 1176 aaKnown RBP7.21□□□□□ -1.26
CD44-204ENST00000279452 PCDHA7Q9UN72 937 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 PHLPP2Q6ZVD8 1323 aa7.21□□□□□ -1.26
CD44-204ENST00000279452 TRIP12Q14669 1992 aaPredicted RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 TMEM265A0A087WTH1 108 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 LINC01553A4QN01 128 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 C9IYK1 514 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 K7ERI5 159 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 POLR2DO15514 142 aaKnown RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 HOXA2O43364 376 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 DGKIO75912 1065 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 NPTXRO95502 500 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 HARSP12081 509 aaKnown RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 SKIP12755 728 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 PLS3P13797 630 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 FOSL2P15408 326 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 AXLP30530 894 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 CTNNB1P35222 781 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 DDIT3P35638 169 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 EFNA5P52803 228 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 TAP1Q03518 808 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 DSC3Q14574 896 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 GRIN2CQ14957 1233 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 PCBP1Q15365 356 aaKnown RBP eCLIP7.2□□□□□ -1.26
CD44-204ENST00000279452 CDCA2Q69YH5 1023 aaPredicted RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 GPR153Q6NV75 609 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 ECHDC2Q86YB7 292 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 HACE1Q8IYU2 909 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 CEP57L1Q8IYX8 460 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 IQUBQ8NA54 791 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 HELQQ8TDG4 1101 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 LRRC15Q8TF66 581 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms