RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TMEM161BQ8NDZ6 487 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 PLEKHO2Q8TD55 490 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 NOX5Q96PH1 765 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 ANKZF1Q9H8Y5 726 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 CYP26B1Q9NR63 512 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 PFASO15067 1338 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 UBE4BO95155 1302 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 SPATA31C2B4DYI2 1134 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 PALMO75781 387 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 LCA5LO95447 670 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 CNGA1P29973 690 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 MIS18BP1Q6P0N0 1132 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ALKBH5Q6P6C2 394 aaKnown RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 GLYCTKQ8IVS8 523 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 SMAP1Q8IYB5 467 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ANKRD13AQ8IZ07 590 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 POMGNT1Q8WZA1 660 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 SYN2Q92777 582 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ZNF668Q96K58 619 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 MKNK1Q9BUB5 465 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 POLR3FQ9H1D9 316 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 UBE2TQ9NPD8 197 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ADSSP30520 456 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 LMBRD2Q68DH5 695 aaPredicted RBP19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ABHD15Q6UXT9 468 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 CHST13Q8NET6 341 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 CDHR1Q96JP9 859 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 XPNPEP1Q9NQW7 623 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 ST7Q9NRC1 585 aa19.52■□□□□ 0.72
CAPN1-201ENST00000279247 SOWAHBA6NEL2 793 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 MAFGO15525 162 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 EIF3JO75822 258 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 ABCB4P21439 1286 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 GTF2BQ00403 316 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 PHLDB3Q6NSJ2 640 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 TRIM50Q86XT4 487 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 ERO1BQ86YB8 467 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 KAT5Q92993 513 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 SUGCTQ9HAC7 445 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 NMRK2Q9NPI5 230 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 ZNF302Q9NR11 478 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 HARSP12081 509 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 UBA1P22314 1058 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 STAT1P42224 750 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 KCTD19Q17RG1 926 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 PAPD7Q5XG87 772 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 DDX41Q9UJV9 622 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 JRKLQ9Y4A0 524 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 SUPT20HL2P0C7V6 817 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 CYP2C8P10632 490 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 MS4A14Q96JA4 679 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 ACP6Q9NPH0 428 aa19.51■□□□□ 0.71
CAPN1-201ENST00000279247 LUC7LQ9NQ29 371 aaKnown RBP19.51■□□□□ 0.71
CAPN1-201ENST00000279247 SNRNP35Q16560 246 aaKnown RBP19.5■□□□□ 0.71
CAPN1-201ENST00000279247 GDAP1L1Q96MZ0 367 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 F8VZ95 297 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 ATP4AP20648 1035 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 INTS8Q75QN2 995 aaKnown RBP19.5■□□□□ 0.71
CAPN1-201ENST00000279247 ARHGEF19Q8IW93 802 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 ATP6V0A4Q9HBG4 840 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 APEX2Q9UBZ4 518 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 NAGPAQ9UK23 515 aa19.5■□□□□ 0.71
CAPN1-201ENST00000279247 STBD1O95210 358 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 GGPS1O95749 300 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 TMEM63BQ5T3F8 832 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 CCDC181Q5TID7 509 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 ZNF662Q6ZS27 426 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 RIOX2Q8IUF8 465 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 PPM1KQ8N3J5 372 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 FAM213AQ9BRX8 229 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 SNX12Q9UMY4 172 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 FOXN3O00409 490 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-201ENST00000279247 VSNL1P62760 191 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 PPATQ06203 517 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 PPP2R5AQ15172 486 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 CC2D1AQ6P1N0 951 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-201ENST00000279247 IFT74Q96LB3 600 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 ARFGAP3Q9NP61 516 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 A0A0G2JLL6 359 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-201ENST00000279247 DGAT1O75907 488 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 SOX5P35711 763 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 MXI1P50539 228 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 EMC2Q15006 297 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 PRRT2Q7Z6L0 340 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-201ENST00000279247 OSBPL9Q96SU4 736 aa19.49■□□□□ 0.71
CAPN1-201ENST00000279247 WDR81Q562E7 1941 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.713e-11■■■■■ 33.2
CAPN1-201ENST00000279247 JAM2P57087 298 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 TUBB2AQ13885 445 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 SEZ6Q53EL9 994 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 TAF3Q5VWG9 929 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 VPS36Q86VN1 386 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 FBXO16Q8IX29 292 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-201ENST00000279247 KIFAP3Q92845 792 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 GLG1Q92896 1179 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 TUBB2BQ9BVA1 445 aa19.48■□□□□ 0.71
CAPN1-201ENST00000279247 CHORDC1Q9UHD1 332 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-201ENST00000279247 HYOU1Q9Y4L1 999 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms