RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 PODXLO00592 558 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 MT-ND3P03897 115 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 DPYDQ12882 1025 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 CASP8Q14790 479 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 EMBQ6PCB8 327 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 TIPINQ9BVW5 301 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 VCX3BQ9H321 246 aa12.07□□□□□ -0.48
USP6NL-201ENST00000277575 DIS3Q9Y2L1 958 aaKnown RBP12.07□□□□□ -0.48
USP6NL-201ENST00000277575 MST1RQ04912 1400 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 SUN1O94901 812 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 SDC4P31431 198 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.489e-9■■■■■ 68.7
USP6NL-201ENST00000277575 SNAPC2Q13487 334 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 CUL1Q13616 776 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 RWDD4Q6NW29 188 aaKnown RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 PCGF5Q86SE9 256 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ZNF564Q8TBZ8 553 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 MICAL1Q8TDZ2 1067 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 TMEM143Q96AN5 459 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ATG4CQ96DT6 458 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 AGBL1Q96MI9 1066 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ZBED2Q9BTP6 218 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ABCB6Q9NP58 842 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 FBXO28Q9NVF7 368 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 CIITAP33076 1130 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 PSMC1P62191 440 aaKnown RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 TSPY1Q01534 308 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 IQCB1Q15051 598 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 LMBRD2Q68DH5 695 aaPredicted RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 CENPUQ71F23 418 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 DCLK2Q8N568 766 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 TTC39CQ8N584 583 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 RIT2Q99578 217 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 LIMA1Q9UHB6 759 aaKnown RBP12.06□□□□□ -0.48
USP6NL-201ENST00000277575 BCAP29Q9UHQ4 241 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 PRKCBP05771 671 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 SRGNP10124 158 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 SLITRK6Q9H5Y7 841 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 TUBE1Q9UJT0 475 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 TLK1Q9UKI8 766 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 CAPN11Q9UMQ6 739 aa12.06□□□□□ -0.48
USP6NL-201ENST00000277575 M0QYV0 167 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 TSNAXIP1Q2TAA8 658 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 TTC13Q8NBP0 860 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 HDAC11Q96DB2 347 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 KIF12Q96FN5 646 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 DONSONQ9NYP3 566 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 SUCLA2Q9P2R7 463 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 PCSK1NQ9UHG2 260 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NOL3O60936 208 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 RPA1P27694 616 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 CCT5P48643 541 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 AP3M2P53677 418 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ASPHQ12797 758 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 THOC5Q13769 683 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 MXRA8Q9BRK3 442 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NUP85Q9BW27 656 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ACSL3O95573 720 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 SOX5P35711 763 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 EPHB1P54762 984 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NNTQ13423 1086 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 GLE1Q53GS7 698 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 PDXDC1Q6P996 788 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 SPATS2Q86XZ4 545 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 HEY1Q9Y5J3 304 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 A8MXQ7 604 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 EIF3BP55884 814 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 RPS6P62753 249 aaKnown RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ZNF211Q13398 564 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 TSTA3Q13630 321 aaPredicted RBP12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 WDR72Q3MJ13 1102 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ALS2CLQ60I27 953 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 ZDHHC15Q96MV8 337 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 NUF2Q9BZD4 464 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 KIF9Q9HAQ2 790 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 HSPBP1Q9NZL4 362 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 STAP1Q9ULZ2 295 aa12.05□□□□□ -0.48
USP6NL-201ENST00000277575 IQGAP1P46940 1657 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 KIAA0391O15091 583 aaKnown RBP12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MAFGO15525 162 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 SEPT6Q14141 434 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 FBXO38Q6PIJ6 1188 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 TRIM72Q6ZMU5 477 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 MYLK4Q86YV6 388 aaPredicted RBP12.04□□□□□ -0.48
USP6NL-201ENST00000277575 LMNTD2Q8IXW0 634 aa12.04□□□□□ -0.48
USP6NL-201ENST00000277575 ANKRD13AQ8IZ07 590 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms