RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 SRBD1Q8N5C6 995 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 TBC1D10AQ9BXI6 508 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 RNF26Q9BY78 433 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 TRIM7Q9C029 511 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 LRMDAQ9H2I8 198 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 TUBGCP4Q9UGJ1 667 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 SAP30BPQ9UHR5 308 aaKnown RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 A6NJR5 290 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 KRIT1O00522 736 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 PSMA7O14818 248 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 KLRC4O43908 158 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 RTP1P59025 263 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 BTG3Q14201 252 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 PALB2Q86YC2 1186 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 ZSCAN29Q8IWY8 852 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 ARPP21Q9UBL0 812 aaPredicted RBP16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 UBR3Q6ZT12 1888 aa16.92■□□□□ 0.3
CTDSP1-201ENST00000273062 TLR2O60603 784 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 TMCC1O94876 653 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 RCAN1P53805 252 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 KCNMA1Q12791 1236 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 TGFBRAP1Q8WUH2 860 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 ERP27Q96DN0 273 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 DNAJC1Q96KC8 554 aaKnown RBP16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 HAPLN3Q96S86 360 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 KIAA1683Q9H0B3 1180 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 ZMYND12Q9H0C1 365 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 CTTNBP2NLQ9P2B4 639 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 GMEB1Q9Y692 573 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 NEK3P51956 506 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 RPS6KA1Q15418 735 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 PARP6Q2NL67 630 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 CRY2Q49AN0 593 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 ZNF449Q6P9G9 518 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 LRRC8CQ8TDW0 803 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 LRRC15Q8TF66 581 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 HPS3Q969F9 1004 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 HIC2Q96JB3 615 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 FAM192AQ9GZU8 254 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 IL17RBQ9NRM6 502 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 MAST2Q6P0Q8 1798 aa16.91■□□□□ 0.3
CTDSP1-201ENST00000273062 LAMB1P07942 1786 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 PP2D1A8MPX8 630 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 O00370 1275 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 CAPN15O75808 1086 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 NUDT17P0C025 328 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 VHLP40337 213 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 ZNF804AQ7Z570 1209 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 ANKRD42Q8N9B4 389 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 TAF4BQ92750 862 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 ABTB1Q969K4 478 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 MAGEA13PA6NCF6 341 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 MAGEB3O15480 346 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 SKIV2L2P42285 1042 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 DENND2CQ68D51 928 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 PROM2Q8N271 834 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 METTL13Q8N6R0 699 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 CERKQ8TCT0 537 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 NEK9Q8TD19 979 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 ANKS1AQ92625 1134 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 SLC7A6OSQ96CW6 309 aaPredicted RBP16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 TUBGCP5Q96RT8 1024 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 PABPC3Q9H361 631 aaKnown RBP16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 SEMA4AQ9H3S1 761 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
CTDSP1-201ENST00000273062 PRPF3O43395 683 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 CBX6O95503 412 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 ZBTB48P10074 688 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 PMS2P54278 862 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 ARID5AQ03989 594 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 NPY5RQ15761 445 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 SPTY2D1Q68D10 685 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 SMC1BQ8NDV3 1235 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 SPIRE2Q8WWL2 714 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 SEC14L1Q92503 715 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 KCNN1Q92952 543 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 DDX27Q96GQ7 796 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 CD209Q9NNX6 404 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 FAM114A2Q9NRY5 505 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 CTNNAL1Q9UBT7 734 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 A0A0J9YVX5 310 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 PGRMC1O00264 195 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 KRT36O76013 467 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 ADRA2BP18089 450 aa16.89■□□□□ 0.29
CTDSP1-201ENST00000273062 ATP2C1P98194 919 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms