RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 UNC45AQ9H3U1 944 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ZNF556Q9HAH1 456 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 UTP6Q9NYH9 597 aaKnown RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 PRRG1O14668 218 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 CLDN3O15551 220 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 MAP3K13O43283 966 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 KRT37O76014 449 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ADD1P35611 737 aaKnown RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 SNX31Q8N9S9 440 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 SH3GL3Q99963 347 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 FANCLQ9NW38 375 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 SFI1A8K8P3 1242 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 M0QYV0 167 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 VAMP4O75379 141 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 TRIM71Q2Q1W2 868 aaKnown RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 VN1R5Q7Z5H4 357 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 TMEM245Q9H330 911 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 SERPINB10P48595 397 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 ADNPQ9H2P0 1102 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ALS2CLQ60I27 953 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 MRPL40Q9NQ50 206 aaKnown RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 MED23Q9ULK4 1368 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 KRT75O95678 551 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 LCP1P13796 627 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 SPATA1Q5VX52 437 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 HIBCHQ6NVY1 386 aaPredicted RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 ZNF274Q96GC6 653 aaPredicted RBP13.38□□□□□ -0.27
CDH11-201ENST00000268603 MUC3BQ9H195 1237 aa13.38□□□□□ -0.27
CDH11-201ENST00000268603 UBE4BO95155 1302 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 NT5DC4Q86YG4 428 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 KANSL2Q9H9L4 492 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH11-201ENST00000268603 RAPGEF6Q8TEU7 1601 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 ABCC1P33527 1531 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 BTBD18B2RXH4 712 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 DR1Q01658 176 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 FAM182BQ5T319 152 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 NPATQ14207 1427 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 CYTH3O43739 400 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 TLR2O60603 784 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 ATP1A1P05023 1023 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 MAPK6Q16659 721 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 PLD3Q8IV08 490 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 RPRD1BQ9NQG5 326 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 NOVA2Q9UNW9 492 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 TADA2AO75478 443 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 MYBP10242 640 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 CASP14P31944 242 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 OTUD7AQ8TE49 926 aaPredicted RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 DIS3LQ8TF46 1054 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 DEPDC7Q96QD5 511 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 HEMGNQ9BXL5 484 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 STN1Q9H668 368 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 AURKCQ9UQB9 309 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 KLHL24Q6TFL4 600 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 LUZP2Q86TE4 346 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
CDH11-201ENST00000268603 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
CDH11-201ENST00000268603 PSMC5P62195 406 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 EFHC2Q5JST6 749 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 SH3BP1Q9Y3L3 701 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 CCDC78A2IDD5 438 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 NBPF26B4DH59 902 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 SEC31AO94979 1220 aaKnown RBP13.36□□□□□ -0.27
CDH11-201ENST00000268603 CAPN1P07384 714 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 GRK2P25098 689 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 EPHB4P54760 987 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 ARL4CP56559 192 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 SMYD4Q8IYR2 804 aaPredicted RBP13.36□□□□□ -0.27
CDH11-201ENST00000268603 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 ZMYND12Q9H0C1 365 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 ARHGEF3Q9NR81 526 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 ALDH6A1Q02252 535 aaKnown RBP13.36□□□□□ -0.27
CDH11-201ENST00000268603 SIX5Q8N196 739 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 RNF181Q9P0P0 153 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 USP17L3A6NCW0 530 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 USP17L4A6NCW7 530 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 ATP9BO43861 1147 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 MLNP12872 115 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 HEATR6Q6AI08 1181 aaKnown RBP13.36□□□□□ -0.27
CDH11-201ENST00000268603 LRRC8BQ6P9F7 803 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 USP17L1Q7RTZ2 530 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 NUP93Q8N1F7 819 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 STAP1Q9ULZ2 295 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 SH3BP5LQ7L8J4 393 aa13.36□□□□□ -0.27
CDH11-201ENST00000268603 SLC35F6Q8N357 371 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms