RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 KIAA1586Q9HCI6 787 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 CAPN1P07384 714 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 OSBPP22059 807 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 HOXC9P31274 260 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 OMA1Q96E52 524 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
SRRM4-201ENST00000267260 C6orf203Q9P0P8 240 aaPredicted RBP12.84□□□□□ -0.35
SRRM4-201ENST00000267260 PPIP5K2O43314 1243 aa12.83□□□□□ -0.35
SRRM4-201ENST00000267260 LRRC31Q6UY01 552 aa12.83□□□□□ -0.35
SRRM4-201ENST00000267260 RTL3Q8N8U3 475 aaKnown RBP12.83□□□□□ -0.35
SRRM4-201ENST00000267260 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.35
SRRM4-201ENST00000267260 ELF1P32519 619 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FGD2Q7Z6J4 655 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 AHI1Q8N157 1196 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 RMDN1Q96DB5 314 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 MXD3Q9BW11 206 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 APOL6Q9BWW8 343 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FAM32AQ9Y421 112 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 SCRN1Q12765 414 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 CCDC149Q6ZUS6 474 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 TOGARAM2Q6ZUX3 1019 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FAM47EQ6ZV65 393 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 DPP9Q86TI2 863 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FGGP02679 453 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 PSMA4P25789 261 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 LVRNQ6Q4G3 990 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 PPP1R2P1Q96PQ5 205 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FANCEQ9HB96 536 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 DPY19L2Q6NUT2 758 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 DDX56Q9NY93 547 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 FTCDO95954 541 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 PGM1P36871 562 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 TMEM154Q6P9G4 183 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 VSTM4Q8IW00 320 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 SCFD1Q8WVM8 642 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 LRRC59Q96AG4 307 aaKnown RBP12.83□□□□□ -0.36
SRRM4-201ENST00000267260 RHBDL2Q9NX52 303 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 NPC1L1Q9UHC9 1359 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 GUCA1CO95843 209 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 TMC5Q6UXY8 1006 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 CYP4F11Q9HBI6 524 aa12.83□□□□□ -0.36
SRRM4-201ENST00000267260 MAPKBP1O60336 1514 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 TARSL2A2RTX5 802 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 NEURL1BA8MQ27 555 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 PSAPP07602 524 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 TBXAS1P24557 533 aaPredicted RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 PMS2P54278 862 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 APOA5Q6Q788 366 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 GANCQ8TET4 914 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 GPKOWQ92917 476 aaPredicted RBP eCLIP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 RAD21L1Q9H4I0 556 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 DCTN4Q9UJW0 460 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 LRRIQ3A6PVS8 624 aaPredicted RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 S100A9P06702 114 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 WNT8AQ9H1J5 351 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ARHGAP31Q2M1Z3 1444 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 NNMTP40261 264 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 KRT17Q04695 432 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 C16orf72Q14CZ0 275 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 DCPSQ96C86 337 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 CLIC6Q96NY7 704 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ZNF839A8K0R7 811 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 MYBL1P10243 752 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 NLRP11P59045 1033 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 LAMB3Q13751 1172 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 TRIM72Q6ZMU5 477 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 FOPNLQ96NB1 174 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 PRKAG2Q9UGJ0 569 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 M0R2C6 588 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 UBXN8O00124 270 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ARL6IP4Q66PJ3 421 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 C16orf89Q6UX73 402 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 SNF8Q96H20 258 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ACAP3Q96P50 834 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 MAP2P11137 1827 aaKnown RBP12.82□□□□□ -0.36
SRRM4-201ENST00000267260 TK2O00142 265 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ANGPT2O15123 496 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 SNAP25P60880 206 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ZNF827Q17R98 1081 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 PRUNE1Q86TP1 453 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 SCN3BQ9NY72 215 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 ANAPC7Q9UJX3 599 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 AP4S1Q9Y587 144 aa12.82□□□□□ -0.36
SRRM4-201ENST00000267260 DNAL1Q4LDG9 190 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 CDH24Q86UP0 819 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 CLEC4FQ8N1N0 589 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 EME1Q96AY2 570 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 ZFP42Q96MM3 310 aa12.81□□□□□ -0.36
SRRM4-201ENST00000267260 MRPL1Q9BYD6 325 aaKnown RBP12.81□□□□□ -0.36
SRRM4-201ENST00000267260 CCDC195A0A1B0GUA6 201 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms