RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 BTBD7Q9P203 1132 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 NAGPAQ9UK23 515 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 NFASCO94856 1347 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 GOLGA8IPA6NC78 632 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 GOLGA8JA6NMD2 632 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 IREB2P48200 963 aaKnown RBP18.37■□□□□ 0.53
CHKA-201ENST00000265689 VAMP7P51809 220 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 PPP3CAQ08209 521 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 LONRF2Q1L5Z9 754 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 XXYLT1Q8NBI6 393 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 CDHR1Q96JP9 859 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 PAGR1Q9BTK6 254 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
CHKA-201ENST00000265689 SCN4AP35499 1836 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 ANKRD63C9JTQ0 380 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 F8VZ95 297 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 EVI5O60447 810 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 PRLRP16471 622 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 SOX5P35711 763 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 PLA2G4AP47712 749 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 C2orf54Q08AI8 447 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 ALKBH5Q6P6C2 394 aaKnown RBP18.36■□□□□ 0.53
CHKA-201ENST00000265689 INTS8Q75QN2 995 aaKnown RBP18.36■□□□□ 0.53
CHKA-201ENST00000265689 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 PLEKHO2Q8TD55 490 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 GPR88Q9GZN0 384 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 SMARCAL1Q9NZC9 954 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 TBX20Q9UMR3 447 aa18.36■□□□□ 0.53
CHKA-201ENST00000265689 TULP1O00294 542 aaPredicted RBP18.35■□□□□ 0.53
CHKA-201ENST00000265689 LRRN2O75325 713 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 FTCDO95954 541 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 FERP16591 822 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 DMP1Q13316 513 aaPredicted RBP18.35■□□□□ 0.53
CHKA-201ENST00000265689 C1orf220Q5T0J3 134 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 PHLDB3Q6NSJ2 640 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 ABHD15Q6UXT9 468 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 LBX2Q6XYB7 198 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 CHST13Q8NET6 341 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 LMO3Q8TAP4 145 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 ST7Q9NRC1 585 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 EHD2Q9NZN4 543 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 APEX2Q9UBZ4 518 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 SEPT9Q9UHD8 586 aaPredicted RBP18.35■□□□□ 0.53
CHKA-201ENST00000265689 DENND3A2RUS2 1198 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 DDX3XO00571 662 aaKnown RBP eCLIP18.35■□□□□ 0.536e-22■□□□□ 10.4
CHKA-201ENST00000265689 STAM2O75886 525 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 ADSSP30520 456 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 GCLMP48507 274 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 SMTNP53814 917 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 PRKCEQ02156 737 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 TMEM174Q8WUU8 243 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 FUT8Q9BYC5 575 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 ABCB6Q9NP58 842 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 KMT5AQ9NQR1 393 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 LCTP09848 1927 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 PFASO15067 1338 aa18.35■□□□□ 0.53
CHKA-201ENST00000265689 TCP1P17987 556 aaKnown RBP18.34■□□□□ 0.53
CHKA-201ENST00000265689 STXBP2Q15833 593 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 ARHGAP44Q17R89 818 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 CYFIP1Q7L576 1253 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 RPGRIP1Q96KN7 1286 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 IWS1Q96ST2 819 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 NENFQ9UMX5 172 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 ADRB2P07550 413 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 BEND6Q5SZJ8 279 aaPredicted RBP18.34■□□□□ 0.53
CHKA-201ENST00000265689 C10orf76Q5T2E6 689 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 SEPT14Q6ZU15 432 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 ANKRD13AQ8IZ07 590 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 HNRNPLLQ8WVV9 542 aaKnown RBP18.34■□□□□ 0.53
CHKA-201ENST00000265689 SAAL1Q96ER3 474 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 TXNRD2Q9NNW7 524 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 XPNPEP1Q9NQW7 623 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 PCDHGC5Q9Y5F6 944 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 WDR81Q562E7 1941 aa18.34■□□□□ 0.53
CHKA-201ENST00000265689 GRID2IPA4D2P6 1211 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 ATP8B1O43520 1251 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 DNA2P51530 1060 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 MIS18BP1Q6P0N0 1132 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 CBWD2Q8IUF1 395 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 MAP4K3Q8IVH8 894 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 SLC17A8Q8NDX2 589 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.53
CHKA-201ENST00000265689 KIFAP3Q92845 792 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 PDLIM7Q9NR12 457 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 CYP26B1Q9NR63 512 aa18.33■□□□□ 0.53
CHKA-201ENST00000265689 IQCA1LA6NCM1 817 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 DKC1O60832 514 aaKnown RBP eCLIP18.33■□□□□ 0.52
CHKA-201ENST00000265689 SUPT20HL2P0C7V6 817 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 CYP2C8P10632 490 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 CNGA1P29973 690 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 NF2P35240 595 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 VPS36Q86VN1 386 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 DNERQ8NFT8 737 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 LNX1Q8TBB1 728 aaPredicted RBP18.33■□□□□ 0.52
CHKA-201ENST00000265689 SUGCTQ9HAC7 445 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 PACSIN2Q9UNF0 486 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms