RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 DARSP14868 501 aaKnown RBP17.52■□□□□ 0.4
USP13-201ENST00000263966 CPA1P15085 419 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 ARL4CP56559 192 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 PEX3P56589 373 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 RASSF3Q86WH2 238 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 GFPT2O94808 682 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 TFDP2Q14188 446 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
USP13-201ENST00000263966 TBCKQ8TEA7 893 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 POLE3Q9NRF9 147 aa17.52■□□□□ 0.4
USP13-201ENST00000263966 ATP7AQ04656 1500 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 PODXLO00592 558 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 TLR2O60603 784 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 RARBP10826 455 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 EIF3BP55884 814 aaKnown RBP17.52■□□□□ 0.39
USP13-201ENST00000263966 RHOT2Q8IXI1 618 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 EXD1Q8NHP7 514 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 MYCBPQ99417 103 aaPredicted RBP17.52■□□□□ 0.39
USP13-201ENST00000263966 WARS2Q9UGM6 360 aaKnown RBP17.52■□□□□ 0.39
USP13-201ENST00000263966 ZFYVE16Q7Z3T8 1539 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 ABCE1P61221 599 aaKnown RBP17.52■□□□□ 0.39
USP13-201ENST00000263966 SNX30Q5VWJ9 437 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 DIS3Q9Y2L1 958 aaKnown RBP17.52■□□□□ 0.39
USP13-201ENST00000263966 ATP8A1Q9Y2Q0 1164 aa17.52■□□□□ 0.39
USP13-201ENST00000263966 COPEO14579 308 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 TRIML2Q8N7C3 387 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 DTNAQ9Y4J8 743 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 CIAO1O76071 339 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 FDX1P10109 184 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 NEK2P51955 445 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 CFAP99D6REC4 459 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 PSMD3O43242 534 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.397e-8■□□□□ 11
USP13-201ENST00000263966 HMOX2P30519 316 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 TTC17Q96AE7 1141 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 GPATCH8Q9UKJ3 1502 aaKnown RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 TAP1Q03518 808 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 TMEM35BQ8NCS4 154 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 VMP1Q96GC9 406 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 SNRNP48Q6IEG0 339 aaKnown RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 FOXP3Q9BZS1 431 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 ARAP3Q8WWN8 1544 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 UTP6Q9NYH9 597 aaKnown RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 RAB23Q9ULC3 237 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 CAV1Q03135 178 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 LRRC63Q05C16 580 aa17.51■□□□□ 0.39
USP13-201ENST00000263966 TMED8Q6PL24 325 aaPredicted RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 XPO4Q9C0E2 1151 aaKnown RBP17.51■□□□□ 0.39
USP13-201ENST00000263966 LRG1P02750 347 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 ACADMP11310 421 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 COPB1P53618 953 aaKnown RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 C6orf118Q5T5N4 469 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 DEPDC1Q5TB30 811 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 OSCP1Q8WVF1 389 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 SSH2Q76I76 1423 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 CDH2P19022 906 aaPredicted RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 MAP2K2P36507 400 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 DDX42Q86XP3 938 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP13-201ENST00000263966 ST13P4Q8IZP2 240 aaPredicted RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 TM6SF1Q9BZW5 370 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 SDC4P31431 198 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 KIRREL3Q8IZU9 778 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 UHMK1Q8TAS1 419 aaKnown RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 RAPGEF5Q92565 580 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 CARSP49589 748 aaKnown RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 PARK7Q99497 189 aaKnown RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 CLCN1P35523 988 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 ADCY2Q08462 1091 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 FBXW10Q5XX13 1052 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 USP13Q92995 863 aaPredicted RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 MMP10P09238 476 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 LRRC74AQ0VAA2 488 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 P2RX5Q93086 422 aa17.5■□□□□ 0.39
USP13-201ENST00000263966 PRG3Q9Y2Y8 225 aaPredicted RBP17.5■□□□□ 0.39
USP13-201ENST00000263966 USP17L10C9JJH3 530 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 ANXA11P50995 505 aaKnown RBP17.49■□□□□ 0.39
USP13-201ENST00000263966 MAPRE2Q15555 327 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 SLC38A7Q9NVC3 462 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 NMRK1Q9NWW6 199 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 CMA1P23946 247 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 AP3B2Q13367 1082 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 GRAMD1BQ3KR37 738 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 DDIASQ8IXT1 998 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 APOA1P02647 267 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 IFNAR2P48551 515 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 PLTPP55058 493 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 GRAMD4Q6IC98 578 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 TRIM8Q9BZR9 551 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 PRAG1Q86YV5 1406 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 DDHD2O94830 711 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 FGAP02671 866 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 LIG3P49916 1009 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 KRT76Q01546 638 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 SPARCL1Q14515 664 aa17.49■□□□□ 0.39
USP13-201ENST00000263966 ZNF513Q8N8E2 541 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms