RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 BYSLQ13895 437 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
CHMP3-201ENST00000263856 RASGEF1CQ8N431 466 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 STK38LQ9Y2H1 464 aa13.38□□□□□ -0.27
CHMP3-201ENST00000263856 SMCHD1A6NHR9 2005 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 K7ENM7 598 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 RASSF9O75901 435 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 TRIM37O94972 964 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 CALCAP01258 141 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 UBL4BQ8N7F7 174 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 NAP1L3Q99457 506 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 PAIP2Q9BPZ3 127 aaKnown RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 STK33Q9BYT3 514 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 COL16A1Q07092 1604 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 ARFGEF1Q9Y6D6 1849 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 EMSYQ7Z589 1322 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 CCDC169A6NNP5 214 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 ANKRD63C9JTQ0 380 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 GAS7O60861 476 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 EZRP15311 586 aaKnown RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 EPM2AIP1Q7L775 607 aaPredicted RBP13.37□□□□□ -0.27
CHMP3-201ENST00000263856 SLFN11Q7Z7L1 901 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 CCDC63Q8NA47 563 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 SGSM3Q96HU1 749 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 FAM129AQ9BZQ8 928 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 DNAJC18Q9H819 358 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 APEX2Q9UBZ4 518 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 ASIC3Q9UHC3 531 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
CHMP3-201ENST00000263856 EYA4O95677 639 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 COMTP21964 271 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 MAPK7Q13164 816 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 C1orf54Q8WWF1 131 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 PABPC3Q9H361 631 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 RASGRF2O14827 1237 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 NDUFB10O96000 172 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 NEDD9Q14511 834 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 TNIP1Q15025 636 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 RC3H1Q5TC82 1133 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 ARHGEF19Q8IW93 802 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 LENG9Q96B70 501 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 AGPAT1Q99943 283 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 TACO1Q9BSH4 297 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 DDX23Q9BUQ8 820 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 CNOT10Q9H9A5 744 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 UBAP1LF5GYI3 381 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 PPEF1O14829 653 aaPredicted RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 SSR1P43307 286 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 EIF3BP55884 814 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 ZFYVE27Q5T4F4 411 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 ERMARDQ5T6L9 678 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 DUPD1Q68J44 220 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 TTC27Q6P3X3 843 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 KIF2BQ8N4N8 673 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
CHMP3-201ENST00000263856 FAM212AQ96EL1 285 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 AGPAT3Q9NRZ7 376 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 ABCF3Q9NUQ8 709 aa13.36□□□□□ -0.27
CHMP3-201ENST00000263856 A0A0A6YYK5 440 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 KIAA0391O15091 583 aaKnown RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 SLC16A3O15427 465 aaKnown RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 PPFIA2O75334 1257 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 GH2P01242 217 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CREB1P16220 341 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CLNS1AP54105 237 aaKnown RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CALCOCO2Q13137 446 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 NAA25Q14CX7 972 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 C2CD6Q53TS8 623 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ZSWIM2Q8NEG5 633 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 SLC30A5Q8TAD4 765 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 FAM84AQ96KN4 292 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CARD9Q9H257 536 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CTNNAL1Q9UBT7 734 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ZMYM2Q9UBW7 1377 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 CCT8L1PA6NM43 557 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 ZC3H3Q8IXZ2 948 aaKnown RBP13.35□□□□□ -0.27
CHMP3-201ENST00000263856 GLT8D2Q9H1C3 349 aa13.35□□□□□ -0.27
CHMP3-201ENST00000263856 PHF2O75151 1096 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms