RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 GRHL1Q9NZI5 618 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 CTTNBP2NLQ9P2B4 639 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 ZBTB21Q9ULJ3 1066 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 CD2APQ9Y5K6 639 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 SIPA1L1O43166 1804 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 KIAA0391O15091 583 aaKnown RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 BBOX1O75936 387 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 FTLP02792 175 aaPredicted RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 RPL13P26373 211 aaKnown RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 PPP3CAQ08209 521 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 BMT2Q1RMZ1 405 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 RUFY4Q6ZNE9 571 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 OTOP1Q7RTM1 612 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 PLEKHO2Q8TD55 490 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 SEC14L1Q92503 715 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 XPO6Q96QU8 1125 aaKnown RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 PRMT1Q99873 361 aaKnown RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
ZNF541-201ENST00000263351 DDX23Q9BUQ8 820 aaKnown RBP17.88■□□□□ 0.45
ZNF541-201ENST00000263351 G3V3G9 751 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 PPFIA2O75334 1257 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 MMEP08473 750 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 CYP3A4P08684 503 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 PMS2P54278 862 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 MYL7Q01449 175 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 DCAF8Q5TAQ9 597 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 SYDE2Q5VT97 1194 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 LRCH2Q5VUJ6 765 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 MICALCLQ6ZW33 695 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 FAM178BQ8IXR5 827 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 LRRC34Q8IZ02 419 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 CEP89Q96ST8 783 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 CBWD1Q9BRT8 395 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 STK33Q9BYT3 514 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 CTNNAL1Q9UBT7 734 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 EXOC3O60645 756 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 SGPL1O95470 568 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 TMEM253P0C7T8 217 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 PYGMP11217 842 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 BIRC3Q13489 604 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 TRIP13Q15645 432 aaPredicted RBP17.87■□□□□ 0.45
ZNF541-201ENST00000263351 EPC2Q52LR7 807 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 SEPT14Q6ZU15 432 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 ZNF720Q7Z2F6 126 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 CACNA2D3Q8IZS8 1091 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 DAW1Q8N136 415 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 TLCD1Q96CP7 247 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 TDRD3Q9H7E2 651 aaKnown RBP17.87■□□□□ 0.45
ZNF541-201ENST00000263351 METTL14Q9HCE5 456 aaKnown RBP17.87■□□□□ 0.45
ZNF541-201ENST00000263351 APEX2Q9UBZ4 518 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 EMSYQ7Z589 1322 aa17.87■□□□□ 0.45
ZNF541-201ENST00000263351 POLRMTO00411 1230 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 FAM133BQ5BKY9 247 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 CYB5D1Q6P9G0 228 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 CDAN1Q8IWY9 1227 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 RPUSD2Q8IZ73 545 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 FUKQ8N0W3 1084 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 PARVGQ9HBI0 331 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 TPX2Q9ULW0 747 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 KIF13BQ9NQT8 1826 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 MYH11P35749 1972 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 SLC16A3O15427 465 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 COMTP21964 271 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 PTGIRP43119 386 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 SNX1Q13596 522 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 TNIP1Q15025 636 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 SWT1Q5T5J6 900 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 YTHDF3Q7Z739 585 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 SYCE1Q8N0S2 351 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 LMBR1Q8WVP7 490 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 HVCN1Q96D96 273 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 ELAC2Q9BQ52 826 aaKnown RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 COA1Q9GZY4 146 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 PRR12Q9ULL5 1215 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 NCANO14594 1321 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 A0A0A6YYK5 440 aaPredicted RBP17.86■□□□□ 0.45
ZNF541-201ENST00000263351 AP3B2Q13367 1082 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 VPS72Q15906 364 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 AGBL2Q5U5Z8 902 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 PRUNE1Q86TP1 453 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 SYCP3Q8IZU3 236 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 UNC45AQ9H3U1 944 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 FAM114A2Q9NRY5 505 aa17.86■□□□□ 0.45
ZNF541-201ENST00000263351 FRMPD4Q14CM0 1322 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 SMTNP53814 917 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 MAPK7Q13164 816 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 LONRF1Q17RB8 773 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ERMARDQ5T6L9 678 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 C1orf131Q8NDD1 294 aaKnown RBP17.85■□□□□ 0.45
ZNF541-201ENST00000263351 ATXN2LQ8WWM7 1075 aaKnown RBP17.85■□□□□ 0.45
ZNF541-201ENST00000263351 CCT6BQ92526 530 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 TBC1D31Q96DN5 1066 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 NCAPGQ9BPX3 1015 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 FBXO28Q9NVF7 368 aa17.85■□□□□ 0.45
ZNF541-201ENST00000263351 GREB1LQ9C091 1923 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms